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    LOC106338505 uncharacterized LOC106338505 [ Brassica oleracea (wild cabbage) ]

    Gene ID: 106338505, updated on 30-Oct-2024

    Summary

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    Gene symbol
    LOC106338505
    Gene description
    uncharacterized LOC106338505
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica oleracea
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC106338505 in Genome Data Viewer
    Location:
    chromosome: C4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current BOL (GCF_000695525.1) C4 NC_027751.1 (25855215..25857909, complement)

    Chromosome C4 - NC_027751.1Genomic Context describing neighboring genes Neighboring gene probable protein S-acyltransferase 14 Neighboring gene F-box protein At3g60790-like Neighboring gene probable pectinesterase 29 Neighboring gene probable pectinesterase 29

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_027751.1 Chromosome C4 Reference BOL Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC106338505

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BOL Primary Assembly

    Genomic

    1. NC_027751.1 Reference BOL Primary Assembly

      Range
      25855215..25857909 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013777466.1 → XP_013632920.1  uncharacterized protein LOC106338505

      UniProtKB/TrEMBL
      A0A0D3BWK0
      Conserved Domains (4) summary
      smart00575
      Location:522 → 549
      ZnF_PMZ; plant mutator transposase zinc finger
      pfam03108
      Location:186 → 237
      DBD_Tnp_Mut; MuDR family transposase
      pfam10551
      Location:284 → 363
      MULE; MULE transposase domain
      pfam15240
      Location:584 → 694
      Pro-rich; Proline-rich
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases