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Submitted SNP(ss) Details: ss89422558           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-0617249
RefSNP(rs#)rs10774561
Submitted Batch IDJWB_snps_no_apoe
Submitted DateFeb 26, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPFeb 26 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Ref=A|Alt=C|Chr=chr12|Position=119522663|Strand=+|dbSNP=+|Score=45|Reads=2:2:3

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss89422558|allelePos=251|len=501|taxid=9606|alleles='A/C'|mol=Genomic
 GCAGGAGTTA TTTTGGGGCC TTGATGGCTC CCTCTGGCTG CCTGTGACCT CCACCCCGTT
 GCAGACACCT CTCCCTTCAC CTGCACGGCT CATTAGCCGC ATTCTGCTGC TCGGCTGCTG
 CTTTCCGTGC CCGCAGTTCC CCGCCCTACC TCGAGGGCCA GCACCTGCTC CCCTCCTCCC
 GGACCCCACA GCCACTCCTG CCACCCCACT ATTTTGCAGG GATAGAGGCT GTTAACTGTT
 TCTTTTTTTA
 M
 TTACCATTTT AATTTTTTAT TTTTTGAGAC GGAGTCTCGC TCTGTTGCTC AGGCTGGAGT
 GCAGTGGCGC GATCTCTGCT CACTGCAACT GCCACCCCCC AGGTTCAAGC GATTCTCCTG
 CCTCAGCCTC CCGAGTAGCT GGGACTATAG GCATGTGCCA CCATGCACCG CTAATGTTAA
 TTTTGTCACC TGTGTCCTAA TCCTCAGACC CCAACTTTGC CTCAGAGCAA TGACCCTCCC
 TCCAGTTCCA

  Submitted Frequency for ss89422558 back to top
There is no frequency submission for ss89422558.


  dbSNP summary of Genotypes for ss89422558 back to top
No sufficient data to compute Hardy-weinberg probability for ss89422558.


  Submitted individual genotype for ss89422558 back to top
There is no individual genotype data for ss89422558.

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