NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss83591765           
Submitter
HandleHGSV
Submitter SNP IDCor18517_DIV_20070510.chr11_10556976-10556977_1
RefSNP(rs#)rs3075191
Submitted Batch IDNA18517-Fosmids-20070510-DIPs
Submitted DateDec 04, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 4 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18517-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleCTCT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize59925135 348-353 52 forward 4

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss83591765|allelePos=201|len=401|taxid=9606|alleles='CTCT/-'|mol=Genomic
 ATGATAAATG TTACAGGCAC CATTGCCACT CACTGATGAC CAGGAGCTGG ACAGAAAGGA
 ACCAAGCTAA GCCTTACTTC CCCTGGGGTT TCATGAAATG GGAGGGAGCT GACAATTGCC
 TGAGATTGAA TTAGCTAGAT AAGACATTGA GCCCCTTGCT TTGCAAACCA GACTGTTTAT
 ATTCCATGTA CTCTCTCTCT
 N
 GTTTATTTCT CTTTTGTTCT TTCTCAGTGT TTGGAAGTGT TAGAAGTTCC AGTCTGTCTC
 TGCTGTATTC ACGGGTGCCA GAGGAAAGGC TTTTTGTCTA GGGCTTTGCT TGACTGCATT
 AAAGGGGAGG AAGGCAATGT GGTGGACTGA GAAATATCAG CAGAGAACCC TCAGGAGGGA
 GATGAGGCCT AAGGAGAACA

  Submitted Frequency for ss83591765 back to top
There is no frequency submission for ss83591765.


  dbSNP summary of Genotypes for ss83591765 back to top
No sufficient data to compute Hardy-weinberg probability for ss83591765.


  Submitted individual genotype for ss83591765 back to top
There is no individual genotype data for ss83591765.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement