Submitter | Handle | HGSV | Submitter SNP ID | Cor19240_DIV_20070510.chr12_105633429-105633448_1 | RefSNP(rs#) | rs556116618 | Submitted Batch ID | NA19240-Fosmids-20070510-DIPs | Submitted Date | Dec 02, 2007 | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Dec 2 2007 12:00:00:000AM |
| Resource Links | Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | NA19240-FOSMIDS-DIPS | Ascertainment Samplesize | 3 | Population | N.D. |
| Allele | Observed Allele | -/TTTTTTTTTTTTTTTTTT | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | DIV | CpG Code | N.D. |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence position quality orientation DIPsize78391020 287-288 61 reverse -18 |
>gnl|dbSNP|ss82790786|allelePos=223|len=645|taxid=9606|alleles='-/TTTTTTTTTTTTTTTTTT'|mol=Genomic TTTCTCCTAA TCACTTCTCA CACTGTTCCT TCTTCTTGGG CTAGCCTCCT TCTACCCTCT
GCCTGATAAA ATCCTACTCA CCTCCTTTGA TGTTTCCCTC ACCCTCCAAG TTAGAATCTT
CCTCCAGACC CTCACAGCAT GGACTTAATT ATATCCTAAT TCTATTTAGG ACTGTTTCCA
GAATAGACTC GGAACTAAAG TTTTTTTTTT TTTTTTTTTT TT
N
GAGGACCAAA TAAATAGGGT CAGATTGCTC CATTCAGGAG CATTTACTCA TTTACTCACC
TATCTATCCA TTTCTCCAAA ATATATTTCT CAGGTGGCTT CTATGTGCTA AACACTTTCG
GATAGGTGGT GATATAATAG CAAACAATAG AAGTGTGGTC CCTGCCCCCT GGGAGTTTAT
GTTTAGAGGT TAAGGTTCTT GATGAGCAAA CTGACAGTAA CAATATAGTG TGAGGAGTGC
TAGGTTGGAA GAAGGGTCAG AGTATCATGG GAGCATGAAG GAGAGGGGAG AAAAGGTATT
CCAAGTAGAG GCAAGAGAGA GCATGTTATT TTTAGGAAAC TTAAAAGTAT ATATCCCAGA
GACTTTTGAT TAATTCCTTC CCCAAAGTTT CCTCTCTCTA TGGAACTACA CCTACTTAGA
GA
There is no frequency submission for ss82790786.
No sufficient data to compute Hardy-weinberg probability for ss82790786.
There is no individual genotype data for ss82790786.
|