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Submitted SNP(ss) Details: ss82790786           
Submitter
HandleHGSV
Submitter SNP IDCor19240_DIV_20070510.chr12_105633429-105633448_1
RefSNP(rs#)rs556116618
Submitted Batch IDNA19240-Fosmids-20070510-DIPs
Submitted DateDec 02, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 2 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19240-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/TTTTTTTTTTTTTTTTTT
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize78391020 287-288 61 reverse -18

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82790786|allelePos=223|len=645|taxid=9606|alleles='-/TTTTTTTTTTTTTTTTTT'|mol=Genomic
 TTTCTCCTAA TCACTTCTCA CACTGTTCCT TCTTCTTGGG CTAGCCTCCT TCTACCCTCT
 GCCTGATAAA ATCCTACTCA CCTCCTTTGA TGTTTCCCTC ACCCTCCAAG TTAGAATCTT
 CCTCCAGACC CTCACAGCAT GGACTTAATT ATATCCTAAT TCTATTTAGG ACTGTTTCCA
 GAATAGACTC GGAACTAAAG TTTTTTTTTT TTTTTTTTTT TT
 N
 GAGGACCAAA TAAATAGGGT CAGATTGCTC CATTCAGGAG CATTTACTCA TTTACTCACC
 TATCTATCCA TTTCTCCAAA ATATATTTCT CAGGTGGCTT CTATGTGCTA AACACTTTCG
 GATAGGTGGT GATATAATAG CAAACAATAG AAGTGTGGTC CCTGCCCCCT GGGAGTTTAT
 GTTTAGAGGT TAAGGTTCTT GATGAGCAAA CTGACAGTAA CAATATAGTG TGAGGAGTGC
 TAGGTTGGAA GAAGGGTCAG AGTATCATGG GAGCATGAAG GAGAGGGGAG AAAAGGTATT
 CCAAGTAGAG GCAAGAGAGA GCATGTTATT TTTAGGAAAC TTAAAAGTAT ATATCCCAGA
 GACTTTTGAT TAATTCCTTC CCCAAAGTTT CCTCTCTCTA TGGAACTACA CCTACTTAGA
 GA

  Submitted Frequency for ss82790786 back to top
There is no frequency submission for ss82790786.


  dbSNP summary of Genotypes for ss82790786 back to top
No sufficient data to compute Hardy-weinberg probability for ss82790786.


  Submitted individual genotype for ss82790786 back to top
There is no individual genotype data for ss82790786.

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