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Submitted SNP(ss) Details: ss81962972           
Submitter
HandleHGSV
Submitter SNP IDCor19129_DIV_20070510.chr12_12749332-12749333_2
RefSNP(rs#)rs57007032
Submitted Batch IDNA19129-Fosmids-20070510-DIPs
Submitted DateNov 30, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 30 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19129-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleTT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize98787669 448-451 44 reverse 2

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss81962972|allelePos=219|len=617|taxid=9606|alleles='TT/-'|mol=Genomic
 AAACTACTTG GAAACATTCT AGGTCAAACA ATCTTATCCT GAGTTATGGA AAAAGGCAAC
 TAATTGCAAA TTGCATTTGA CATTGGAGAT ATAATTGATA CACCAATATA GAAGATCCGA
 GCAGATTATC GAGGTTTGGA GAAAAACACC ATCATTACAG CATTGGGAAA GGCTTTTTGT
 CAAGAATAAA TAGAAATGCA TCTTTTTTTT TTTTTTTT
 N
 GAGACGGAGT CTTGCTCTCT AACCCAGGCT GGAGTGCAGT GGTGCGATCT TGGCCCATGC
 CTGTAATCCC AGCTACTCGG GAGGTTGAGG CAGGAGAATC ACTTGAACTT GGGAGGCGGA
 GGTTACAGTG AGCTGAGATC GTGCTATTGC ACTCCAGCCT GGTCAACAAG AGCGAAACTC
 CATCTCAGAA AAAAAAAATT GCTGAGAATT TATAATAAAG CCATACACTG TTTATCTGGT
 TAATAAGATA GTCTATTATG GTGGGAACAG AAGATGCTGT TCTACAGTGA TTTTCTAAGC
 AGAACATTTG CCAGTTGAAA TGAGAGACTC ACAAGCAAAG CTAATTATTT GCTAATTCTC
 TTAGCATATC CTGCAAAAAT GGTTACTTTT AAAGATAA

  Submitted Frequency for ss81962972 back to top
There is no frequency submission for ss81962972.


  dbSNP summary of Genotypes for ss81962972 back to top
No sufficient data to compute Hardy-weinberg probability for ss81962972.


  Submitted individual genotype for ss81962972 back to top
There is no individual genotype data for ss81962972.

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