NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss81913106           
Submitter
HandleHGSV
Submitter SNP IDCor18555_DIV_20070510.chr6_88441091-88441093_1
RefSNP(rs#)rs57399681
Submitted Batch IDNA18555-Fosmids-20070510-DIPs
Submitted DateNov 30, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 30 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodNA18555-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize94785900 275-276 59 forward -1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss81913106|allelePos=235|len=552|taxid=9606|alleles='-/T'|mol=Genomic
 TGAAGCATGT TTTTGCTTAC TTCATTATAA GAAAGCTATG TCTAGAAACC ATGTATGGAA
 AGGGAGTCAA ATTTGCTGAA TCATGCTTTT GCATATCAAG TTCTTAAAAG AAAAAACTGG
 ATCCTACTGA TATCTGAGGT AATTCTATAG CAATTAAAAT ACCTGTAACA TTCTATCAGG
 CAGTAAGTTA CAGAAGAAGG AATTTATATA TATATATATA TATTTTTTTT TTTT
 N
 AGTAGAGATG GGGTTTCACT GTGTTAGCCA GGATAGTCTC GATCTCCTGA CCTCGTGATC
 CTCCCGCCTC GGCCTCCCAA AGTGCTGGGA TTACAGGCAT GAGCCACCGC GCCCAGCAGA
 AGAAGGCATT TAGAATCAGA ACTCAGTGTT TTGAAACAGC ACTCAAATCT TAGAAAATTA
 ACTTCACTGA TTCCTGGAAA ATGCTTACGT TTTAAAACAC CAACTTTATT CAAATACTAA
 CCCCATCTGT ACATTAAGAA ACAAGCAAAA TAGAAGTAAA TGTTTTATTC TTCCAACTAA
 ATTCCAGTAC TACAAGG

  Submitted Frequency for ss81913106 back to top
There is no frequency submission for ss81913106.


  dbSNP summary of Genotypes for ss81913106 back to top
No sufficient data to compute Hardy-weinberg probability for ss81913106.


  Submitted individual genotype for ss81913106 back to top
There is no individual genotype data for ss81913106.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement