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Submitted SNP(ss) Details: ss80960876           
Submitter
HandleHGSV
Submitter SNP IDCor12878_DIV_20070510.chr1_8315052-8315061_1
RefSNP(rs#)rs577756731
Submitted Batch IDNA12878-Fosmids-20070510-DIPs
Submitted DateNov 26, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 26 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/ACACACAC
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize89954726 277-278 59 reverse -8

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80960876|allelePos=501|len=701|taxid=9606|alleles='-/ACACACAC'|mol=Genomic
 CTAGGACAGG CTGCAGTGGG GTGTGGCGGA GGTGGCAGTA GAGTTGTCCT CTTGCAGGTA
 GAGAAGTGGG CCGTCTACAT AGTCCACTTT AAATAAGGTC AAAGAGGCTC CTCTTTTCAA
 AAAGACACTT CAGGGGCTGG GAATGGTGGC TCATGCCTGT AATTCCAACA CTTTGGGAAG
 CCAAGGCAGG TGGATCACTT GAGCCCAGGA GTTTGAGGCC AGCCTGGGCA ACATGGCGAA
 ACCCCATCTC TACAAAAAAA TACAAGAATT AGCCTGGTGT GGTGGTGTGC ACCTGTAGTT
 CCAGCTATTT GGGAGGCTGA GGTGAGAGGA TCACCTGAGC CCAGGGAGGT TGAGGCTGCA
 CTGAGCGATG ATGACTGCAC TCCAGCCTGG GCTAGATAGA GGGAGACTCT GTCTGTCTGT
 CTGTCTGTCT GTCTCTCTCT CTCTCTCTCT GTTTCTCTCT CTCTCTACAC ACACACACAC
 ACACACACAC ACACACACAC
 N
 CTGCCATATG CTGTTTAAAG CTGAAGTTTT TCCAAACTGG GCCACAGTTC TTCATTCCAA
 ATTTAAAGGG AAGGTTTCTA ATGCACTTAA GTTCACATTA TGGTTAAAAT GCTGATTAGA
 AAGAGTGGGA GATATGCCTG TGTGCCTGCA GGTGGGGAGA GGCTGGGCAG AGGGACAGAA
 AGGGAGATGG CCACTGAGAG

  Submitted Frequency for ss80960876 back to top
There is no frequency submission for ss80960876.


  dbSNP summary of Genotypes for ss80960876 back to top
No sufficient data to compute Hardy-weinberg probability for ss80960876.


  Submitted individual genotype for ss80960876 back to top
There is no individual genotype data for ss80960876.

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