| Submitter | | Handle | HGSV | | Submitter SNP ID | Cor12878_DIV_20070510.chr1_197353470-197353473_1 | | RefSNP(rs#) | rs10590500 | | Submitted Batch ID | NA12878-Fosmids-20070510-DIPs | | Submitted Date | Nov 26, 2007 | | Publication Cited | [1] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Nov 26 2007 12:00:00:000AM |
| | Resource Links | | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | NA12878-FOSMIDS-DIPS | | Ascertainment Samplesize | 3 | | Population | N.D. |
| | Allele | | Observed Allele | -/TT | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | DIV | | CpG Code | N.D. |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence position quality orientation DIPsize87802205 301-302 33 reverse -2 |
>gnl|dbSNP|ss80858937|allelePos=501|len=1001|taxid=9606|alleles='-/TT'|mol=Genomic GCTGTCGCAC AGGCTGTAGT GTAGTGGCAT GATTCTAGCT TGCTGGAACC TTAAACTCCT
GGGCTCAAGA GATCCTCCAG CTTCAGCCTT CTAAGCAGCT GGGACTATAG GTACAAGCCA
GGGCACCCAG CTCAGCATTG TATTTTTAAG GGCCCACTAA TGTGCTGTCA TCCATATTAA
AATTTGAATA TTCATTTTAA TATTATTCAG TGGAAAAAAG AATTGTCACC CAGGTTGGAG
TGCAGTGGTG CCACCTTGGC TTACTGTGCA ACCTCCTGGG CTCAAGCCAA CCTCCCACCT
CAGTTTTCCA AATAGCTAGG ACTACAGGCA CATGCCACCA CACCCATCTA ATTTTGTATT
TTTAGTAGAG ATGGGGTTTT GCTATGTTGC CCAGGCTCCA CCCCCACTTT CTAACATGTC
TTTAATGTGC ACAAATTATT CAACAGATGT TATTCAAAAT GCAGAGTGGG CCATAAAAAG
CATTTTTTTT TTTTTTTTTT
N
GAGACAGGGT CTTGCTCTGT CGCCAGGCTG GAGTGCAGGG GTGCAATCAT GGCTCACTGC
AACTTCTGCC TCCTGGGCTC AAGTGATCCT CCTGCCTCAG CCTCCTGAGT AGCTGGGACC
ACAGGTGTGA CCACAGGCAT GTGCCACCGT GCCCGGCTAA TTTTTGGTAT TTTTTTTTGC
AGAGACTGGG TTTCCCCATG TTGCCCAGGC TGGTCTTGAA CTACTGGCCT CAAGCAATCC
TCTTGCCTTG ACCTCCCAAA GTGCTGGGAT TACAGGCGTG GGCCCCTGCA CCCAGACATC
TCCTCTCCTG ATTTTTCTCC TCCCTCACTA GCTACTCTGA GCCTCCTTTC TCTTCTCTCA
ATCTCTATAC ATTGGGGAGC CCCATGGGCT GGGTCACAGG CTTCTTCTTT CCTCATCTGT
GCTCTCTCCT CAGATAAGAT CAACAAATTC CACGGCTCTG AATATCATGC ATGCATCAAA
GACTCTCAAA ATCATATCTC
There is no frequency submission for ss80858937.
No sufficient data to compute Hardy-weinberg probability for ss80858937.
There is no individual genotype data for ss80858937.
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