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Submitted SNP(ss) Details: ss80807797           
Submitter
HandleHGSV
Submitter SNP IDCor12878_DIV_20070510.chr11_119786224-119786226_1
RefSNP(rs#)rs398045657
Submitted Batch IDNA12878-Fosmids-20070510-DIPs
Submitted DateNov 26, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 26 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize84334806 185-186 59 forward -1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80807797|allelePos=201|len=401|taxid=9606|alleles='-/T'|mol=Genomic
 GCAAGTTTAA CCTGAGTGGT CAACTTTTGC AGCAGATGAT TGAAATGCTA ATATTTCTAG
 ACTGTGTCCT GTCTTCCAAA GATACAATAA CCATGTTTGT GAAGTTCATA CCTATTTTTC
 CTTTTCCTTT GCAGTTTTAT TTGCCCTCTT TCCTTCTTTT GGAGTCTGAT TAGGGTTTTG
 TTTTGGGGTT TTTTTTTTTT
 N
 GGTTTTTTGT TTTTTGAGAA AAGTGAATAA GAGAGGAATT ACCTGGAGCT AAGATTTTAA
 AAATAATTTC TGAAAGACTG ATAAATTATT TCTTTTTTTA GGAAGATTCC AAATTTGGCC
 TCGAAGGGAA ATCAGGTCAT CTTTAATAGA GCCACAAATC TATAGAGCAG AAGCTCCCCC
 AGGTGCAGAT AGATGTTTCC

  Submitted Frequency for ss80807797 back to top
There is no frequency submission for ss80807797.


  dbSNP summary of Genotypes for ss80807797 back to top
No sufficient data to compute Hardy-weinberg probability for ss80807797.


  Submitted individual genotype for ss80807797 back to top
There is no individual genotype data for ss80807797.

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