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Submitted SNP(ss) Details: ss80281593           
Submitter
HandleHGSV
Submitter SNP IDCor18507_DIV_20070510.chrX_15419457-15419458_1
RefSNP(rs#)rs56407617
Submitted Batch IDNA18507-Fosmids-20070510-DIPs
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleGTGT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize66217322 473-478 50 forward 4

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80281593|allelePos=501|len=857|taxid=9606|alleles='GTGT/-'|mol=Genomic
 TTAGTGGTGG TGGCAGTTAA GGAGAGGTTG GTAGCAAAGA CTTATTTAAT TGAAACCAAA
 TAAGTGAATT TCTAACTGTA AACTGGAGAG TCCTTGGAGA TATTTTATGA CCTTTACTGA
 ATTCATATTA TGCAAGCTGC CTTTGTCTAC CTCTAGAGCA GCCCTGGAAA ACAGAAATAT
 AATGTGAGCT TCGTGTGACT TAAAATTTTC TAGTAGCTGC ACTAAAATAA ACAGATGAAA
 CTAATTTTAA TAATGTATTT TTTGTCCAAT ATATCCAAGA AAATGTAATT TCAACATGTA
 AACAGTATCA AGTTGACTTT GCATGTTTGT TTGTTTGTTT GTTTTTTGAG ACAGGAACGA
 TCATGGTTCA TTGCAGCCTC AAACTCCTGG GCTCAAGCAA TCCTCCTGCA TCAACCTCCC
 AAGTAGCTAG GACCACAGGT GTGTGCCACC ACACCTGGCT GTGTGTGTGT GTGTGTGTGT
 GTGTGTGTGT GTGTGTGTGT
 N
 AAACAGGGTC TTGCTATATT GCCCAGGCTG GGGCTCCACA TTTTATTTTG TACAATGTCT
 TTGAAATTTG GCTTATGTTT TACACTGTGA GCACACCTGA CTTTGAACTA GCCACATTTC
 AGGTGCTTAA TAACCACATT TGGCTGGTGG CTACGGTACC GGACAGTCCA AGTCTACAGC
 CTGATAGTAT GGCTTGAGAA TCTCTGCAGG CCAGCACCAG GCTATCAGGA AAGACCCCCT
 TTAGTAAATA AATAACTATG CTGTGGCATG ATTATTCATG GATGTGAAAG TGAACTCTAG
 CCAGATAATC TACAACAAGG GATTTTTATC CAACAATGGA ATATTTTATT TTGTCA

  Submitted Frequency for ss80281593 back to top
There is no frequency submission for ss80281593.


  dbSNP summary of Genotypes for ss80281593 back to top
No sufficient data to compute Hardy-weinberg probability for ss80281593.


  Submitted individual genotype for ss80281593 back to top
There is no individual genotype data for ss80281593.

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