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Submitted SNP(ss) Details: ss80208717           
Submitter
HandleHGSV
Submitter SNP IDCor18507_DIV_20070510.chr17_71571380-71571382_1
RefSNP(rs#)rs59638317
Submitted Batch IDNA18507-Fosmids-20070510-DIPs
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize65417930 482-483 61 reverse -1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80208717|allelePos=501|len=784|taxid=9606|alleles='-/A'|mol=Genomic
 TTTCTGCATT TTACTTAACC ATTTTCTGAG CTATAACATA AGCATCAGAA GTTGAATAAA
 ACCTTGCAAT ATCTACCATC TCTTTTTTAA AAAACTCACT TCCAAAAAAA AGTTTACTTT
 GTGAACTTTC CAGGTACAAG ATTGTAAGCT TTCATCTATA TATCAAAACA TGACCTTTCT
 TAAAAAGTTA CAGCTAGATG GCCACGTGCA GTGGCTCACG CTTGCAATCC CAGCACTTTG
 GGAGGTCAAG GCAGGTGGGT GGATCACGAG GTCAGGAGCT CGGGACCAGC CTGGCCAACA
 CAGTGAAACC CTGTCTCTAC TAAAAATAAA AAAATTAGCC AGGCGTGGTG GCACGTGCCT
 ATAATCCCAC CTACTCGGGA GGCTGAGGCA GGAGAATTGC TTGAACCTGA CAGGCAGACG
 TTGCAGTGAG CTGAGAACGC GCCACTGCAC TCCAGCCTGG GCGACAAAGC AAGACTCTGT
 CTGAAAAAAA AAAAAAAAAA
 N
 GTTACAGCTA GTTATAAAAA ACCAAGAGCT TGGGAATACT CATTCTATTT TATGGAATGA
 AGCGTTGCCC AATTTTAAAA AAAGGATAAA AAAAATCAAG AGCTGATAAA CAAAACATGC
 TAACTTCTCC TCTTAAAAGC AAGTTCGGAA AGTTTTTTTC CTCTTCTGAC TGTCACTTTC
 TAACACTAAG AAACTCTGTT CTGTTTAACT GCAGCTTTTT AAAATGTCTT TAATCTCCAC
 AATAAACAAG CTGAATGTTG AGGTACTAAC CTGAGCCTCT AAT

  Submitted Frequency for ss80208717 back to top
There is no frequency submission for ss80208717.


  dbSNP summary of Genotypes for ss80208717 back to top
No sufficient data to compute Hardy-weinberg probability for ss80208717.


  Submitted individual genotype for ss80208717 back to top
There is no individual genotype data for ss80208717.

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