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Submitted SNP(ss) Details: ss77980027           
Submitter
HandleHGSV
Submitter SNP IDCor12156_DIV_20070510.chr14_54221752-54221754_2
RefSNP(rs#)rs796859347
Submitted Batch IDNA12156-Fosmids-20070510-DIPs
Submitted DateOct 15, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 15 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12156-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize106379261 190-191 68 reverse -1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77980027|allelePos=501|len=1001|taxid=9606|alleles='-/C'|mol=Genomic
 CTGGGCCTTT GGCCTGGTAG CCAGAGTGGG CAGGCAGCAG GCCTGCTCTG TGCAGCGTTT
 GACTTGGGGG TTAAGCCGGG TGCCTCAGGG CGGGACCTGG AAGGAGAAGC TGAGCGCAGT
 CCACCATTCA GTTCTGGGTA CCAGGTTTTC AAAGAGGCAT TAAGTGTAGC CAGAGGAGGG
 TGGCCAGGAA GCTGCAGGGG CCTGGAAATC ATACCACCTA AAGATTGTTA GAAAAAACTG
 GAGACTGTTA GCCTGAAAAA GATTTAGGTG AATGGCTGTC TTCCCCTGAA GGGAGAGTAG
 ATTTATCTTT TTGTATTTTT TTATCATAAC ATAAAATCTG CCATTTTAAT CATTTTTAAA
 TATACAGTCC TGTGGCATTA ATTATATTCA CAATGTTGTG TGACCATCAC AGCTATCAAT
 TTCTAGAACT TTATCATCAT CCCAAACAGA AACTCTGTTC CCATTAAACA ATAACTCCCC
 ATTCTTCCTG CCCCCCCCCC
 N
 AGCTCCTGGC AGCCACCATT CTGCTTTCTG ACTACTCAAG AGACCTCATA CAAGTGGAGT
 CATACAGCAT TTGTCCTTTT GTGTCTAGCT TAATTAACTT AGCACAGTGT CCTTGAGGTC
 CATCTATGTT ATAGCATGCA CTGGAATTTC CTTCCTTGTT GAGGCTGAAG AGGATTCCAT
 TGGATGTATA TTCCGCATGT TGTTTACCTA TTCATCTGTT GATGGACATT TGGGTTGCTT
 CCACCTTATG ACTTGTGAAT AATGCTACTG TGAACATTGG TACGCTAGTA CTTGTTCGTA
 GATTTTTTTT CTTTGTGGTT TCAGAAAAAC TGATCTTAGC CAAATGGTTA GAAGTTGCAG
 AGAAGCTGAT TGTGGCTTTA GTAACCCCAG CTCTCTTCAG TGGTGGAAAG GCTCCCCATG
 GTTGGGAGTG GTGTGTGGTA AGAACACTTA CAACCAGAAC AGAGAGAACC AGAAAATCTC
 TGAGGTCCCT TCCATCTCCA

  Submitted Frequency for ss77980027 back to top
There is no frequency submission for ss77980027.


  dbSNP summary of Genotypes for ss77980027 back to top
No sufficient data to compute Hardy-weinberg probability for ss77980027.


  Submitted individual genotype for ss77980027 back to top
There is no individual genotype data for ss77980027.

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