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Submitted SNP(ss) Details: ss77870175           
Submitter
HandleHGSV
Submitter SNP IDCor12156_DIV_20070510.chr8_75909677-75909696_1
RefSNP(rs#)rs55730814
Submitted Batch IDNA12156-Fosmids-20070510-DIPs
Submitted DateOct 15, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 15 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodNA12156-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/CTGATGATTCACATTCTC
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize104079738 94-95 68 forward -18

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss77870175|allelePos=201|len=556|taxid=9606|alleles='-/CTGATGATTCACATTCTC'|mol=Genomic
 TGGGACCTGG AAGCTGTGTG GCCCTGAGCA AGGAATTCCC ATCACTGGTT GCACTTTCTG
 GTTGGGTTAC AACATGTGTG TGTTCTTCTG ACCATGAGAT GCCTAGAATT TATGTGACAA
 ATTACTCTCC AATTGCTCTA CTTCTGTGGA GTTAACTTGG CAGAGTCAGT GGGCACATTC
 TCCTGATGAT TCACATTCTC
 N
 ATGAACTAAG CTGCTTGTAG GTCACATAAA TGTGTGTTGT AAATGCAGAC GATGTTGTTA
 TAATGGAAAG GGATTCATTT TTTTCATCTT TGTTTCATTT ATATTCACTG CAGTAAACTC
 ATCCAGTCTT ATGGATTAAA ATACCACTTA TATGCTGATG ATGTTTCAAA TTATATTTAT
 AGGCCTCTCA GTTGAATTTT AGACTAATTT ATTCACCTAC CTACTTTTCC AAAATTGAGC
 TCCAGATATT CACAACCTTA CCCCCATCCC TTCAAATCTT ACTTTAGAAT TTTTTTTATC
 TTTTTAAAAA TTTTGGATTT TCAGAAAGTT TCATACAATT CTCACGTGTT ACATT

  Submitted Frequency for ss77870175 back to top
There is no frequency submission for ss77870175.


  dbSNP summary of Genotypes for ss77870175 back to top
No sufficient data to compute Hardy-weinberg probability for ss77870175.


  Submitted individual genotype for ss77870175 back to top
There is no individual genotype data for ss77870175.

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