NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss553374738           
Submitter
HandleLUNTER
Submitter SNP IDJPTCHB_9_33667008-33667010
RefSNP(rs#)rs372383778
Submitted Batch IDindel_calls_from_1000_genomes_pilot_1_JPTCHB
Submitted DateNov 21, 2012
Publication CitedN.D.
First entry to dbSNPNov 21 2012 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA_SHORT_SEQUENCE_DATA
Ascertainment Samplesize358
PopulationN.D.
Allele
Observed AlleleGCC/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss553374738|allelePos=26|len=51|taxid=9606|alleles='GCC/-'|mol=Genomic
 AAAACCGGCC CGGGTCCCTC CATGT
 N
 GCCGCCGCCG CCGCCGCCGC CGCCG

  Submitted Frequency for ss553374738 back to top
There is no frequency submission for ss553374738.


  dbSNP summary of Genotypes for ss553374738 back to top
No sufficient data to compute Hardy-weinberg probability for ss553374738.


  Submitted individual genotype for ss553374738 back to top
There is no individual genotype data for ss553374738.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement