>gnl|dbSNP|ss52074234|allelePos=401|len=801|taxid=9606|alleles='C/T'|mol=Genomic
TGTCAGAGAG TCCTCCCTGC TCAGCCTCAA TTCAGCAGGC TGAGTTGTTC CGCTCCTGCA
GTGTGGCACG GAGGCCAGCA GGAGGCGCGG TAGCGGGGCT TCCCGGGACG CCGCCAGAAA
GAAAGGAGTG GGTAGGTCCT GATGGGAATG AAGCTAGAGA AAAGGAGGAA ATGTCCGCTA
GAAGATGGCA CGCCATATCT GGAGTCTGAG CTTTAAGACC TTGATCGAGC CTGAGGGCTG
CAGCTTCAGA CTTGCCCTGT AGGTGGCAGG GCGGATGCCA GGCGCCCAGG GACACGAGGC
CACCCAATGG ATGTCAAGCA GGAGGGGCAG GGACAGAAAG GCCCCACGGC TGCAGACGCG
GGAGGCCCCG AGCCGGAGAC GCTCGTGTGA ACACAGGCGC
Y
GCTCCTGTCA CGGCCCCTTA CTCGCCTTGC TGACTTTAAA CAGTCTCTCC TCGGTGTTCT
CCTTGTCAAA CTGTTCATCC CAGTTTCCTC TGAAATAGAC AGCATTCACC AGAACCAGCC
TTGTCAATGG ATCCACTGAG CCCGGAGAGA GCAACTCCGC AATTTTACCT GAGCGGAAGA
ATTCAAGACC GCATTAGATA GGGGCGGCTG CGGATCCCCG ACACATCAGG AATCGGCTGG
GGCCTTCTCC TTCAGCAGTC AAGTGCACGG ATAGAGAGTT CCACTGTCCC CCAAATATAA
AGGGATACGT GTCCTTAAAG CAAAACAACA AAATCTTCTG GTACGAAAAA CATCATCAAT
TGAATAAAAC ACACAAAGTG AACAAATATG CGTTAATTAT
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | C=0.70353985
| T=0.29646018 | C/C=0.49557522
C/T=0.41592920
T/T=0.08849557
| Pr(chiSq=0.001,df=1)
=1.000 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | C=0.80232561
| T=0.19767442 | C/C=0.65116280
C/T=0.30232558
T/T=0.04651163
| Pr(chiSq=0.095,df=1)
=1.000 | Genotype
Freq. |
| HapMap-JPT | 170 | 170 | C=0.78823531
| T=0.21176471 | C/C=0.64705884
C/T=0.28235295
T/T=0.07058824
| Pr(chiSq=2.022,df=1)
=0.200 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | T=0.60619467
| C=0.39380530 | C/T=0.50442475
T/T=0.35398230
C/C=0.14159292
| Pr(chiSq=0.361,df=1)
=0.584 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.54081631
| C=0.45918366 | C/T=0.42857143
T/T=0.32653061
C/C=0.24489796
| Pr(chiSq=0.921,df=1)
=0.343 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | C=0.84146339
| T=0.15853658 | C/C=0.75609756
C/T=0.17073171
T/T=0.07317073
| Pr(chiSq=5.316,df=1)
=0.025 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | C=0.82941175
| T=0.17058824 | C/C=0.67058825
C/T=0.31764707
T/T=0.01176471
| Pr(chiSq=1.276,df=1)
=0.273 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | C=0.68181819
| T=0.31818181 | C/C=0.45454547
C/T=0.45454547
T/T=0.09090909
| Pr(chiSq=0.200,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | T=0.55555558
| C=0.44444445 | C/T=0.57777780
T/T=0.26666668
C/C=0.15555556
| Pr(chiSq=2.601,df=1)
=0.150 | Genotype
Freq. |
| HAPMAP-MEX | 98 | 98 | C=0.73469388
| T=0.26530612 | C/C=0.53061223
C/T=0.40816328
T/T=0.06122449
| Pr(chiSq=0.108,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | C=0.58741260
| T=0.41258740 | C/T=0.48951048
C/C=0.34265736
T/T=0.16783217
| Pr(chiSq=0.014,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | C=0.71590906
| T=0.28409091 | C/C=0.47727272
C/T=0.47727272
T/T=0.04545455
| Pr(chiSq=2.644,df=1)
=0.150 | Genotype
Freq. |
