Submitted SNP(ss) Details: ss4914593

Submitted SNP(ss) Details: ss4914593

Submitter
Handle	GENETHON
Submitter SNP ID	AFMa310wd9
RefSNP(rs#)	rs3222791
Submitted Batch ID	GenethonSTR_Batch1
Submitted Date	Jul 11, 2002
Publication Cited	N.D.
First entry to dbSNP	Jul 11 2002 12:00:00:000AM

Resource Links
STS Accession	Z52881
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	D19S886
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	PCR
Ascertainment Samplesize	56
Population	N.D.

Allele
Observed Allele	(CA)/11/16/17/18/19
Ancestral Allele
Allele Origin	N/A
SNP Class	Microsatellite
CpG Code	nonCpG

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
CA strand primer TGGATCTACACTCCGGCGT strand primer ATTTTACTGGCTGGCACTTGThe microsatellite repeat motif and flanking sequence for thisvariation submission was extracted from human genome sequence for contigannotation purposes. NCBI makes no warranty that the inferred repeatmotif is the correct sequence for the alleles as reported with frequencydata.MOLTYPE: Genomic

Fasta sequence (Legend)

 AGCTCTAATT AA
 TGGATCTACA CTCCGGCGAT TTTNT
 N
 CCCCAAACAT CATCTCCTTT TGGAGCCAGC ATTGGAGAGG TAGGAAAAAA ATCCTCCATG
 AAATGAATAA AATGCCAAGT GCCAGCCAGT AAAAT
 GGNTTGGATT TTGAGACGTC TGGGGAGGGN CGGAGGGAGG GATGGCTCGG TTCCAGGAAC
 CCGCAGCCAC CCCCTCCAGC CCCCTGGCCA GGTGTCCCCG GGGGNNGGAC AAGGGGTCCC
 CTCCCTGGGT NTGCGAGAGG GTGCTGGAGT NCTGGTNTCC TCA

Submitted Frequency for ss4914593

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
CEPH_GENETHON - MULTI-NATIONAL	56	(CA)17=0.35699999 (CA)18=0.46399999 (CA)19=0.14300001	(CA)11=0.01800000 (CA)16=0.01800000	0.636 +/-0.048		0.630	GenethonSTR_Batch1	GENETHON

dbSNP summary of Genotypes for ss4914593

No sufficient data to compute Hardy-weinberg probability for ss4914593.

Submitted individual genotype for ss4914593

There is no individual genotype data for ss4914593.

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