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Submitted SNP(ss) Details: ss44743596           
Submitter
HandleABI
Submitter SNP IDhCV2116893
RefSNP(rs#)rs2244693
Submitted Batch IDxplore_hum_chr6_1
Submitted DateJul 19, 2005
Publication CitedN.D.
First entry to dbSNPJul 19 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 4
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss44743596|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
 TCCCGGGACG CCGCCAGAAA GAAAGGAGTG GGTAGGTCCT GATGGGAATG AAGCTAGAGA
 AAAGGAGGAA ATGTCCGCTA GAAGATGGCA CGCCATATCT GGAGTCTGAG CTTTAAGACC
 TTGATCGAGC CTGAGGGCTG CAGCTTCAGA CTTGCCCTGT AGGTGGCAGG GCGGATGCCA
 GGCGCCCAGG GACACGAGGC CACCCAATGG ATGTCAAGCA GGAGGGGCAG GGACAGAAAG
 GCCCCACGGC TGCAGACGCG GGAGGCCCCG AGCCGGAGAC GCTCGTGTGA ACACAGGCGC
 Y
 GCTCCTGTCA CGGCCCCTTA CTCGCCTTGC TGACTTTAAA CAGTCTCTCC TCGGTGTTCT
 CCTTGTCAAA CTGTTCATCC CAGTTTCCTC TGAAATAGAC AGCATTCACC AGAACCAGCC
 TTGTCAATGG ATCCACTGAG CCCGGAGAGA GCAACTCCGC AATTTTACCT GAGCGGAAGA
 ATTCAAGACC GCATTAGATA GGGGCGGCTG CGGATCCCCG ACACATCAGG AATCGGCTGG
 GGCCTTCTCC TTCAGCAGTC AAGTGCACGG ATAGAGAGTT CCACTGTCCC CCAAATATAA

  Submitted Frequency for ss44743596 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AoD_Japanese
EAST ASIA
90C=0.69000000
T=0.31000000
xplore_hum_chr6_1ABI
AoD_African_American
NORTH AMERICA
90C=0.56000000
T=0.44000000
xplore_hum_chr6_1ABI
AoD_Chinese
EAST ASIA
90C=0.66000003
T=0.34000000
xplore_hum_chr6_1ABI
AoD_Caucasian
NORTH AMERICA
92C=0.73000002
T=0.27000001
xplore_hum_chr6_1ABI


  dbSNP summary of Genotypes for ss44743596 back to top
No sufficient data to compute Hardy-weinberg probability for ss44743596.


  Submitted individual genotype for ss44743596 back to top
There is no individual genotype data for ss44743596.

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