NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3644313673           
Submitter
HandleBEROUKHIMLAB
Submitter SNP ID1148036
RefSNP(rs#)clustering in process
Submitted Batch IDPRJNA421100
Submitted DateJan 12, 2018
Publication Cited[1] Genome-wide detection of structural variants and indels by local assembly
First entry to dbSNPJan 12 2018 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodSRX3538696
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed Allele-/CTCT
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3644313673|allelePos=26|len=51|taxid=9606|alleles='-/CTCT'|mol=Genomic
 AACCAGACTG TTTATATTCC ATGTA
 N
 CTCTCTCTCT GTTTATTTCT CTTTT

  Submitted Frequency for ss3644313673 back to top
There is no frequency submission for ss3644313673.


  dbSNP summary of Genotypes for ss3644313673 back to top
No sufficient data to compute Hardy-weinberg probability for ss3644313673.


  Submitted individual genotype for ss3644313673 back to top
There is no individual genotype data for ss3644313673.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement