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Submitted SNP(ss) Details: ss2799052598           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_3_129808287
RefSNP(rs#)rs1443956222
Submitted Batch IDgenome_batch_chr3
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2799052598|allelePos=26|len=51|taxid=9606|alleles='G/A'|mol=Genomic
 GATGTGGCCA TCTTAATTGA GATAT
 R
 CTCTTAGTGT AAAATATACA CTAGA

  Submitted Frequency for ss2799052598 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AFR8700G=0.99988508
A=0.00011494
gnomad-AFRGNOMAD
OTH974G=1.00000000
A=0.00000000
gnomad-OTHGNOMAD
FIN3458G=1.00000000
A=0.00000000
gnomad-FINGNOMAD
NFE14912G=1.00000000
A=0.00000000
gnomad-NFEGNOMAD
EAS1620G=1.00000000
A=0.00000000
gnomad-EASGNOMAD
FEMALE13766G=0.99992734
A=0.00007264
gnomad-FEMALEGNOMAD
ASJ302G=1.00000000
A=0.00000000
gnomad-ASJGNOMAD
AMR834G=1.00000000
A=0.00000000
gnomad-AMRGNOMAD
MALE17034G=1.00000000
A=0.00000000
gnomad-MALEGNOMAD


  dbSNP summary of Genotypes for ss2799052598 back to top
No sufficient data to compute Hardy-weinberg probability for ss2799052598.


  Submitted individual genotype for ss2799052598 back to top
There is no individual genotype data for ss2799052598.

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