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Submitted SNP(ss) Details: ss2796787011           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_3_101383513
RefSNP(rs#)rs1490633050
Submitted Batch IDgenome_batch_chr3
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2796787011|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 TCTGTGTTCT CTTTAGCATC TCTTT
 Y
 TGGCTGTTTC ATCTTTTTTC CTCTT

  Submitted Frequency for ss2796787011 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
OTH982T=1.00000000
C=0.00000000
gnomad-OTHGNOMAD
MALE17118T=1.00000000
C=0.00000000
gnomad-MALEGNOMAD
EAS1622T=1.00000000
C=0.00000000
gnomad-EASGNOMAD
FIN3494T=1.00000000
C=0.00000000
gnomad-FINGNOMAD
NFE15010T=0.99993336
C=0.00006662
gnomad-NFEGNOMAD
AFR8730T=1.00000000
C=0.00000000
gnomad-AFRGNOMAD
FEMALE13858T=0.99992782
C=0.00007216
gnomad-FEMALEGNOMAD
ASJ302T=1.00000000
C=0.00000000
gnomad-ASJGNOMAD
AMR836T=1.00000000
C=0.00000000
gnomad-AMRGNOMAD


  dbSNP summary of Genotypes for ss2796787011 back to top
No sufficient data to compute Hardy-weinberg probability for ss2796787011.


  Submitted individual genotype for ss2796787011 back to top
There is no individual genotype data for ss2796787011.

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