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Submitted SNP(ss) Details: ss2773760075           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_2_56319084
RefSNP(rs#)rs1489693351
Submitted Batch IDgenome_batch_chr2
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleCTCA/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2773760075|allelePos=26|len=51|taxid=9606|alleles='CTCA/-'|mol=Genomic
 AGCAGACTGG CTTGGCATAC TCACT
 N
 CTCCTTATTA GCATAAGGAC CCTGA

  Submitted Frequency for ss2773760075 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
OTH924CTCA=0.99891776
-=0.00108225
gnomad-OTHGNOMAD
AFR8564CTCA=1.00000000
-=0.00000000
gnomad-AFRGNOMAD
MALE16698CTCA=0.99994010
-=0.00005989
gnomad-MALEGNOMAD
ASJ300CTCA=1.00000000
-=0.00000000
gnomad-ASJGNOMAD
NFE14508CTCA=1.00000000
-=0.00000000
gnomad-NFEGNOMAD
FEMALE13392CTCA=1.00000000
-=0.00000000
gnomad-FEMALEGNOMAD
EAS1622CTCA=1.00000000
-=0.00000000
gnomad-EASGNOMAD
FIN3356CTCA=1.00000000
-=0.00000000
gnomad-FINGNOMAD
AMR816CTCA=1.00000000
-=0.00000000
gnomad-AMRGNOMAD


  dbSNP summary of Genotypes for ss2773760075 back to top
No sufficient data to compute Hardy-weinberg probability for ss2773760075.


  Submitted individual genotype for ss2773760075 back to top
There is no individual genotype data for ss2773760075.

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