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Submitted SNP(ss) Details: ss2758109778           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_1_93309114
RefSNP(rs#)rs1468560412
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2758109778|allelePos=26|len=51|taxid=9606|alleles='T/G'|mol=Genomic
 TTGGAGCACC ACGCAGTAGG TAGTC
 K
 TTGAGTAACT GACAAGCTTT TGCCA

  Submitted Frequency for ss2758109778 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE13854T=1.00000000
G=0.00000000
gnomad-FEMALEGNOMAD
OTH982T=1.00000000
G=0.00000000
gnomad-OTHGNOMAD
AMR838T=1.00000000
G=0.00000000
gnomad-AMRGNOMAD
FIN3494T=1.00000000
G=0.00000000
gnomad-FINGNOMAD
AFR8730T=1.00000000
G=0.00000000
gnomad-AFRGNOMAD
ASJ302T=1.00000000
G=0.00000000
gnomad-ASJGNOMAD
NFE15006T=0.99993336
G=0.00006664
gnomad-NFEGNOMAD
MALE17120T=0.99994159
G=0.00005841
gnomad-MALEGNOMAD
EAS1622T=1.00000000
G=0.00000000
gnomad-EASGNOMAD


  dbSNP summary of Genotypes for ss2758109778 back to top
No sufficient data to compute Hardy-weinberg probability for ss2758109778.


  Submitted individual genotype for ss2758109778 back to top
There is no individual genotype data for ss2758109778.

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