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Submitted SNP(ss) Details: ss2751780406           
Submitter
HandleGNOMAD
Submitter SNP IDgnomad_1_13007213
RefSNP(rs#)rs1490189787
Submitted Batch IDgenome_batch_chr1
Submitted DateMay 17, 2017
Publication CitedN.D.
First entry to dbSNPMay 17 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2751780406|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 TGCATTTAGA GGAAAACATT CAAGC
 Y
 TCAAATTGTT CATATGAAAA AAAAA

  Submitted Frequency for ss2751780406 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AMR522T=1.00000000
C=0.00000000
gnomad-AMRGNOMAD
FIN2674T=1.00000000
C=0.00000000
gnomad-FINGNOMAD
FEMALE7914T=1.00000000
C=0.00000000
gnomad-FEMALEGNOMAD
ASJ102T=1.00000000
C=0.00000000
gnomad-ASJGNOMAD
NFE7426T=1.00000000
C=0.00000000
gnomad-NFEGNOMAD
MALE8850T=0.99988699
C=0.00011299
gnomad-MALEGNOMAD
AFR4542T=1.00000000
C=0.00000000
gnomad-AFRGNOMAD
EAS922T=0.99891537
C=0.00108460
gnomad-EASGNOMAD
OTH576T=1.00000000
C=0.00000000
gnomad-OTHGNOMAD


  dbSNP summary of Genotypes for ss2751780406 back to top
No sufficient data to compute Hardy-weinberg probability for ss2751780406.


  Submitted individual genotype for ss2751780406 back to top
There is no individual genotype data for ss2751780406.

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