NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss208960211           
Submitter
HandleBCM-HGSC-SUB
Submitter SNP IDBCM_CMT_1011-3415646
RefSNP(rs#)rs113584356
Submitted Batch IDBCM_CMT_snps_submission_20100308
Submitted DateMar 15, 2010
Publication CitedN.D.
First entry to dbSNPMar 15 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBCM_CMT_1011_METHOD
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
chrY,18202089,+,novel,.,.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss208960211|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 ATGCTTTCCA GGGCATGCGC ACCGCTCTCA GGTGAATCCA TTCCAGTCTG CCTTGTCCTT
 CGCAAAGAAA AGAGAGCTCT GCAGGGGCGG TGGCTCATGC CTGTAATCCC AGCAATTTGG
 GAGGTTGAGG AGGGCCGATC ATCTGAGATC AGGAGTTCAA GATCAGCTTG GCCAACATAG
 TGAAACCCTG TCTCTATAAA AATACAAAAA TTAGCCGGGC ATGATGGCGG GTGCCTGTAA
 TCCCAGCTAC
 Y
 CAGGAGGCTG AAGTGGGAGA ATCGCTTGAA CCCGGGGAGG CGGATGCCTC CCGCTTGAAC
 CCGGCAGGCG CACATGCCAC CATGCTGGGC TAATTTTTGT ATTTTTAGTA GAAACAGGGT
 TTCACCATGT TGGCCAGGCT GGTTTTGAAC TCCTGACCTC AAGCAATCTG CCTGCGTTAG
 CCTCCCAAAG TGTTGGGATT ACAGGCGTGA GCCACCGCAC CCAGCGTATG TGTATAGAGC
 TCCTCGAGAG

  Submitted Frequency for ss208960211 back to top
There is no frequency submission for ss208960211.


  dbSNP summary of Genotypes for ss208960211 back to top
No sufficient data to compute Hardy-weinberg probability for ss208960211.


  Submitted individual genotype for ss208960211 back to top
There is no individual genotype data for ss208960211.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement