NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss202146228           
Submitter
HandleBUSHMAN
Submitter SNP IDBUSHMAN-chr3-12264799
RefSNP(rs#)rs13081389
Submitted Batch IDBUSHMAN1
Submitted DateFeb 16, 2010
Publication CitedN.D.
First entry to dbSNPFeb 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBUSHMAN_METHODS
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss202146228|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 GGGTGGTCCT GATCTCCTGA CCTCGTGATC CGCCCACCTC AGCCTCCCAA AGTGCTGAGA
 TTACAGGCGT GAGCTACCAC TCCCGGCCGA TCTTCTTAAG TTTTAACAGA GTGCTTTTTT
 AATCATCTGC TTAGGTATAC CCAACTTAAG CCCATACATA AAAATGGCCA CTTGGGCACT
 TTTATTAATG GTCAAACACT
 R
 AAATTGTAAT AAGGAAATCA GAAAAGGTCA TTAACAAATG ATTTAAAGAA AAAAATACAA
 ACAGCCATTT TAAATAATGT TTACCTCACT AGCTATCAAA TATATTTAAA TAAAAAGATA
 CCATTCCATT AAAAAAAAAA AAAAAAAAAA AAAAGCCCAA GCCAGGTGTA GAGGTGCACA
 TTTGTAATCC CAGGTGCTCG

  Submitted Frequency for ss202146228 back to top
There is no frequency submission for ss202146228.


  dbSNP summary of Genotypes for ss202146228 back to top
No sufficient data to compute Hardy-weinberg probability for ss202146228.


  Submitted individual genotype for ss202146228 back to top
There is no individual genotype data for ss202146228.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement