NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss193829977           
Submitter
HandleBUSHMAN
Submitter SNP IDBUSHMAN-chr5-150857693-150857694
RefSNP(rs#)rs113166440
Submitted Batch IDBUSHMAN8
Submitted DateFeb 16, 2010
Publication CitedN.D.
First entry to dbSNPFeb 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBUSHMAN_METHODS
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed Allele-/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss193829977|allelePos=201|len=401|taxid=9606|alleles='-/T'|mol=Genomic
 ATGTTTAGCA GCATCCTGGG CCTCTGCCCA CTAGATGTCA GTTGCACCCT GCAAGTTGTG
 ACAACTAAAA ATGTCTCCAG AATTGCCAAA TATCCCCTTG GCTGGAGTGG GGGATGGGGT
 GGAAATTGCC CACCTCAGCT GCCAGGAACC AATGCCTGAG AACATTTGGT GCCCACCTAC
 CTTTAGCTGG GGGGATGTCC
 N
 TTTTTTTTTT TTCTTTTTTT TTGAGACGAA GTCTTGCTCT AATCCCCCAG GCTGGAGTAC
 AATGGTGCAA TCTTGGCTCA CTGCAACCTC CACCTCCTGG GTTCAAGCGA TTCTCTGCCT
 CAGCCTCCTA AGTAGCTGGG ATTACAGGCG CCTGCCACCA CGCCCGACTA ATTTTTGTAT
 TTTTAGTAGA GACGGGGTTT

  Submitted Frequency for ss193829977 back to top
There is no frequency submission for ss193829977.


  dbSNP summary of Genotypes for ss193829977 back to top
No sufficient data to compute Hardy-weinberg probability for ss193829977.


  Submitted individual genotype for ss193829977 back to top
There is no individual genotype data for ss193829977.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement