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Submitted SNP(ss) Details: ss163389545           
Submitter
HandleCOMPLETE_GENOMICS
Submitter SNP IDNA19240_36_chr1_54756695
RefSNP(rs#)rs4927134
Submitted Batch IDNA19240_snpassay_chr1
Submitted DateSep 29, 2009
Publication Cited[1] Human Genome Sequencing Using Unchained Base Reads on Self-assembling DNA Nanoarrays
First entry to dbSNPSep 29 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCOMPLETE GENOMICS SEQUENCING
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss163389545|allelePos=251|len=501|taxid=9606|alleles='A/C'|mol=Genomic
 TCTGGGTCAC AGTCTCCGCT TCTGATGGGG ATGGATGGAA CCAGCTTGTC TCAGAACTCT
 CCCTGCTCCA ATATCCTCCC TTGCCTTAAG CCAAAGTTTC TAATAAGAAA CAGGGCTGTG
 TAGAGATGGG GCGAAGTGCC CCCCTTCTTT ATTCCAGGGC ACACCATTAC TATGCTCTCC
 CACTTGTAGG TTTTGGTACA TGCTGTGCCC CTGCTCCTAA TGCCCGGTCC ACCTTCTCTG
 CCTTTAAGAT
 M
 ATGCAGAGTG GCATTGTCCA GTAGAATGTC CTGAATGACG GATATGTTCT ATATCCCTAC
 TATCCCATAT GGTAGCCATG AGCCACATGT AGCTGTTGGG TCCTTGAAAT ATGACTAGTG
 CAACTGAAGG GCTGAATTTT TAATTTATTT ACTTTTAATT CATTTAAATT TAAATAGCCA
 CATGTCGCTA GTGGCTATTG TATTGGGCAG TGCAGCTCGA GCTCCTTTAA GATCCAGTCC
 ATTCATTCAT

  Submitted Frequency for ss163389545 back to top
There is no frequency submission for ss163389545.


  dbSNP summary of Genotypes for ss163389545 back to top
No sufficient data to compute Hardy-weinberg probability for ss163389545.


  Submitted individual genotype for ss163389545 back to top
There is no individual genotype data for ss163389545.

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