NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss1575213700           
Submitter
HandleEVA_GENOME_DK
Submitter SNP IDEVA_GENOME_DK_gatk_indels_rs369161554
RefSNP(rs#)rs369161554
Submitted Batch IDgatk
Submitted DateFeb 19, 2015
Publication CitedN.D.
First entry to dbSNPFeb 19 2015 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA HISEQ 2500
Ascertainment Samplesize30
PopulationDANISH PAN-GENOME
Allele
Observed AlleleGTGT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1575213700|allelePos=26|len=51|taxid=9606|alleles='GTGT/-'|mol=Genomic
 GCTCCAAAAG GAGATGACGT TTGGG
 N
 GTGTGTGTGT GTGTGTGTGT GTGTG

  Submitted Frequency for ss1575213700 back to top
There is no frequency submission for ss1575213700.


  dbSNP summary of Genotypes for ss1575213700 back to top
No sufficient data to compute Hardy-weinberg probability for ss1575213700.


  Submitted individual genotype for ss1575213700 back to top
There is no individual genotype data for ss1575213700.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement