NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss15518118           
Submitter
HandleSC_SNP
Submitter SNP IDNT_009775.14_11557022
RefSNP(rs#)rs10774561
Submitted Batch IDCHR9_12_NA17119
Submitted DateNov 17, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 14 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR9_12_NA17119.1
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:S9AA_12-465d15.q1kposition:-503quality:56sequence:S9AA_12-465d13.q1kposition:-504quality:42

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss15518118|allelePos=201|len=480|taxid=9606|alleles='A/C'|mol=Genomic
 CCACCCCGTT GCAGACACCT CTCCCTTCAC CTGCACGGCT CATTAGCCGC ATTCTGCTGC
 TCGGCTGCTG CTTTCCGTGC CCGCAGTTCC CCGCCCTACC TCGAGGGCCA GCACCTGCTC
 CCCTCCTCCC GGACCCCACA GCCACTCCTG CCACCCCACT ATTTTGCAGG GATAGAGGCT
 GTTAACTGTT TCTTTTTTTA
 M
 TTACCATTTT AATTTTTTAT TTTTTGAGAC GGAGTCTCGC TCTGTTGCTC AGGCTGGAGT
 GCAGTGGCGC GATCTCTGCT CACTGCAACT GCCACCCCCC AGGTTCAAGC GATTCTCCTG
 CCTCAGCCTC CCGAGTAGCT GGGACTATAG GCATGTGCCA CCATGCACCG CTAATGTTAA
 TTTTGTCACC TGTGTCCTAA TCCTCAGACC CCAACTTTGC CTCAGAGCAA TGACCCTCCC
 TCCAGTTCCA GGATTTTCCC AGACTTGAGC AAAAGCTCA

  Submitted Frequency for ss15518118 back to top
There is no frequency submission for ss15518118.


  dbSNP summary of Genotypes for ss15518118 back to top
No sufficient data to compute Hardy-weinberg probability for ss15518118.


  Submitted individual genotype for ss15518118 back to top
There is no individual genotype data for ss15518118.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement