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Submitted SNP(ss) Details: ss13986094           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDchr1.NT_032977.6_16265296
RefSNP(rs#)rs10127740
Submitted Batch IDWIBR_S226_SNPS_200310
Submitted DateNov 05, 2003
Publication Cited[1] SNPs detected by comparing chromosome 14 reads to NCBI build 34 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 5 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_S226_SNPS_200310
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS226P7953RH6.T0 181 42

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss13986094|allelePos=501|len=723|taxid=9606|alleles='G/T'|mol=Genomic
 AAGGAGCATC AGAGAGTACT GGCAAAACAG TATATACATT TCTATTTTAT TTTTAATGTG
 TTTATGTAtt ttttttttct ttgaaacgga gtctcattct gtcacccagg ctggagtgca
 gtggtgtgat ctcggctcac tgcaacctcc acctcccagg ctcaagcgat tctcctgcct
 cagcctcccg agtggctggg actacagaca tgtaccacca cacctagcta atgtttgtat
 tttttagtag atatggtgtt ttactatgtt tgccaggctg gtctttaact cccgacggac
 cccaagtgat ctgatcacct cggcctccta aagtgctggg attacaggtg tgagtcaccg
 cgcccagccT ATGTATTTTT TAtttttatt tttttgttgc agagatggtg aggatgtctt
 gctttgttac ccaggttggt cttgaatttg tggctttaag tgatcctccc accttggcct
 cccaaagtgc tcgggttaca
 K
 gcgtaagcca acgtgcctgg ccTGTATTTT ATTGTAATTC CTTTTTCCAT TCTCATCTCA
 ATGCATTTCC AAATTAGAGA AGGACATCCT TCTTGTCTCA CACTTTAAAA AATAGCAGTT
 TTCATGGCAA GCCAACATTT TAACATCTTT TCTATGGCCA GCAATGATAG TCATCTTGTG
 GAAACGTGTC TGAGGCATTC TCCTGTCTAT AAAGTCAAAG AT

  Submitted Frequency for ss13986094 back to top
There is no frequency submission for ss13986094.


  dbSNP summary of Genotypes for ss13986094 back to top
No sufficient data to compute Hardy-weinberg probability for ss13986094.


  Submitted individual genotype for ss13986094 back to top
There is no individual genotype data for ss13986094.

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