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Submitted SNP(ss) Details: ss1171587           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-547090
RefSNP(rs#)rs318426
Submitted Batch IDOVLP-000804-101
Submitted DateSep 02, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 2 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC013339 SequenceAccession1:AC013339 SequenceVersion1:4 SequenceContigName1:Contig8 SequenceContigPosition1:1148 SequenceLocalName2:AL133351 SequenceAccession2:AL133351 SequenceVersion2:14 SequenceContigName2:Contig7 SequenceContigPosition2:42477 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1171587|allelePos=101|len=201|taxid=9606|alleles='A/G'|mol=Genomic
 TCAGCCGTTT AACACTGGAG CGCTGCTGAC CATAGCCACG CTGCCACTGG TGTCTGGCAT
 CCACAGCATA GCACAGGGCC CTGCTGGGCA GCAGCACCCT
 R
 GGTCTTAAAG TCTTCAACTG TCTCCCTCTA GGTGGAGAAA GAACTCACTT ACGAGAAGTT
 CGTAGAATGG ACGAGGCTGG ACATGATGGA TGAAGAGGAG

  Submitted Frequency for ss1171587 back to top
There is no frequency submission for ss1171587.


  dbSNP summary of Genotypes for ss1171587 back to top
No sufficient data to compute Hardy-weinberg probability for ss1171587.


  Submitted individual genotype for ss1171587 back to top
There is no individual genotype data for ss1171587.

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