NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss103791994           
Submitter
HandleBCMHGSC_JDW
Submitter SNP IDJWB-4154693
RefSNP(rs#)rs869136797
Submitted Batch IDJWB_snps_indel
Submitted DateJun 06, 2008
Publication Cited[1] The Complete Genome of a Single Individual by Massively Parallel DNA Sequencing
First entry to dbSNPJun 6 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodJWB_SNP_DISCOVERY
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleTTT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
ID = JWB-4154693 | Chromosome = chrX | Start = 39055028 | End = 39055030 | strand = +

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss103791994|allelePos=251|len=501|taxid=9606|alleles='TTT/-'|mol=Genomic
 ATGAGCACAG GCACTGAGAG GAACAGGGAA GGTGGGAGAC GGGCGTGGGA CAGCTCAAGG
 GAGCAAAGAT CTAGGGTGAC TAAGAACACA GGCAGACCTT GGATCTCTTT GGGACTAGCA
 GACTTCAGTT CAAATCTGAC TCTGCCACAG GGATGTGATC CAAGCCTCAG TTTTATTTTC
 CATAAAACTG GTCAATATCT CTATCATGGG ATTGTTATGG AGAGAAAACA AGGTCACCTT
 TTTTTTTTTT
 N
 AACATGCTTG AGGCTGTGAA CTGTGCAGGG TGCTGTAAGG ATGTATGTAT GTAGTTCCAC
 AAATTTGGTG CTCGGGGAGG AGCAGCCCGC CAGGTTAAAG GGAATACGCA AAAGTAGATG
 CTAAGCTTAT TTATGAAACA GCTTCTTTGG CCTTTTGGTG AACCTAGAGA ACAATTTACT
 TCTGGCAAGG CAAAACTGTG ATGAGAAAAA GATTCCGGGC TTTGTGAGCT GTTTGGGGCA
 GCTCCCTGGG

  Submitted Frequency for ss103791994 back to top
There is no frequency submission for ss103791994.


  dbSNP summary of Genotypes for ss103791994 back to top
No sufficient data to compute Hardy-weinberg probability for ss103791994.


  Submitted individual genotype for ss103791994 back to top
There is no individual genotype data for ss103791994.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement