NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss80700088           
Submitter
HandleHGSV
Submitter SNP IDCor18507_SNV_20070510.chr15_61362367
RefSNP(rs#)rs4984258
Submitted Batch IDNA18507-Fosmids-20070510ab
Submitted DateNov 26, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 26 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality66950762 212 6866992566 -548 3766775393 -288 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80700088|allelePos=201|len=701|taxid=9606|alleles='G/C'|mol=Genomic
 GATGGTGTGA TTTAGCAGTA GTTTTTCAAA ATTTATATTT TTGAAATTTG AATTGTTTCT
 TTTTTTGTTC TTGGGAACAT AATAATAAAT GCAAACAAAG AATTTTCCAC TTCAGTAAGA
 TGGACGTGAA CCCAGAAACT GATGATGTTT TGTACTTTCT CACTTCCTGA TGTTGACATT
 GAGAACTCTT AGTGCTGTTA
 S
 TTTTCCTCCC ACGTACTTCC ATAACGTAGA ATTAGGAAGC TTATTAAACT TTTTAGTTTA
 TTTATTTAAT ATATTTGTGA TAGTAGTACT TTGTTGTATC AAATAGCTAA AATCTTTGAT
 TGATTCACTG ATTGACACAG TCTCGCTCTG TCACCCAGGC TAGAGTGCAG TGGCGCAATC
 ATGGCTCACT GCAACTTCCG CCTCCGGGGC TCAAGCAATC CTCCCACCCT CAGCCTCCTG
 AGTAGCTAAG ACTATAAGTG CGTGCCACCA CACCCAGCTA ACTTGTATTT TTTTGGTAGA
 GACATAGGCT CCTTATGTTG CCCAGGCTGG TCTCAAACTC CTGAGCTCAA GCGACCCGCC
 CACCTCAGCC ACCCAAAATG CTGGTATTAC AGGTGTGAGC CACCATGCCC AGACAATTTA
 TCTCTTAAAT TGATTATTTG TCTTTTTATT ATTGAGTTGT AAGAGTTCTG TAGATATAAG
 TCCTTTTTCA AATATGATTT

  Submitted Frequency for ss80700088 back to top
There is no frequency submission for ss80700088.


  dbSNP summary of Genotypes for ss80700088 back to top
No sufficient data to compute Hardy-weinberg probability for ss80700088.


  Submitted individual genotype for ss80700088 back to top
There is no individual genotype data for ss80700088.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement