Submitted SNP(ss) Details: ss4911286

Submitted SNP(ss) Details: ss4911286

Submitter
Handle	GENETHON
Submitter SNP ID	AFM025te5
RefSNP(rs#)	rs3219527
Submitted Batch ID	GenethonSTR_Batch1
Submitted Date	Jul 11, 2002
Publication Cited	N.D.
First entry to dbSNP	Jul 11 2002 12:00:00:000AM

Resource Links
STS Accession	Z16440
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	D6S257
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	PCR
Ascertainment Samplesize	56
Population	N.D.

Allele
Observed Allele	(CA)/23/25/26/27/28/29/30/31/32/33/34
Ancestral Allele
Allele Origin	N/A
SNP Class	Microsatellite
CpG Code	nonCpG

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
CA strand primer GAGAACTCGTCCTTTGGTCCGT strand primer TGAGAAAATGTTCAGGCTAAAGATAThe microsatellite repeat motif and flanking sequence for thisvariation submission was extracted from human genome sequence for contigannotation purposes. NCBI makes no warranty that the inferred repeatmotif is the correct sequence for the alleles as reported with frequencydata.MOLTYPE: Genomic

Fasta sequence (Legend)

 AGCTGGGAGA CTCAATT
 GAGAACTCGT CCTTTGGTCC CCAGTAGAGG GCAGC
 N
 CTATGATAAT CTCTTCTTCA TTATATTAAT CTTGTAAGTC TTATAAGTTA TAACTATATA
 TCTTTAGCCT GAACATTTTC TCA
 TTTTTAAAAG TATGGCTAGA TTTATTTTCT TACAACTTAA TTATTCCAAA GAAGNAAAAA
 ATTGTTCTCA TAAGTTGAAT ACCTAAATCA CAATTAAGCC GTTTATATTT TGATGGTGTT
 GCCTATCTGC TTTACCTTTG CAT

Submitted Frequency for ss4911286

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
CEPH_GENETHON - MULTI-NATIONAL	56	(CA)25=0.14300001 (CA)26=0.10700000 (CA)27=0.05400000 (CA)28=0.14300001 (CA)29=0.12500000 (CA)30=0.19499999 (CA)31=0.14300001 (CA)32=0.03600000	(CA)23=0.01800000 (CA)33=0.01800000 (CA)34=0.01800000	0.868 +/-0.018		0.860	GenethonSTR_Batch1	GENETHON

dbSNP summary of Genotypes for ss4911286

No sufficient data to compute Hardy-weinberg probability for ss4911286.

Submitted individual genotype for ss4911286

There is no individual genotype data for ss4911286.

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