Submitted SNP(ss) Details: ss4911281

Submitted SNP(ss) Details: ss4911281

Submitter
Handle	GENETHON
Submitter SNP ID	AFM023tc1
RefSNP(rs#)	rs3219522
Submitted Batch ID	GenethonSTR_Batch1
Submitted Date	Jul 11, 2002
Publication Cited	N.D.
First entry to dbSNP	Jul 11 2002 12:00:00:000AM

Resource Links
STS Accession	Z50888
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	D18S1158
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	PCR
Ascertainment Samplesize	56
Population	N.D.

Allele
Observed Allele	(CA)/15/16/17/18
Ancestral Allele
Allele Origin	N/A
SNP Class	Microsatellite
CpG Code	nonCpG

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
CA strand primer GCATCTATGCAGTGCCAAATGT strand primer TCATTAGCAACAAGGATCTCCThe microsatellite repeat motif and flanking sequence for thisvariation submission was extracted from human genome sequence for contigannotation purposes. NCBI makes no warranty that the inferred repeatmotif is the correct sequence for the alleles as reported with frequencydata.MOLTYPE: Genomic

Fasta sequence (Legend)

 AGCTTACCTA ACTTTAGCAT AATCATTATT GATCATATTA TTAAGACTG
 GCATCTATGC AGTGCCAAAT AACATGGGAA TA
 N
 AAATATGTAT ATAAAAGAAA GGAGATCCTT GTTGCTAATG A
 GCAACCATTT TACAATTCAC AAGTATTCCA AAGTAGTTTG TCCACGAATT TAGCT

Submitted Frequency for ss4911281

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
CEPH_GENETHON - MULTI-NATIONAL	56	(CA)15=0.46399999 (CA)16=0.28600001	(CA)18=0.03600000	0.656 +/-0.046		0.650	GenethonSTR_Batch1	GENETHON

dbSNP summary of Genotypes for ss4911281

No sufficient data to compute Hardy-weinberg probability for ss4911281.

Submitted individual genotype for ss4911281

There is no individual genotype data for ss4911281.

Disclaimer Privacy statement