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Submitted SNP(ss) Details: ss4911275           
Submitter
HandleGENETHON
Submitter SNP IDAFM022te3
RefSNP(rs#)rs879992597
Submitted Batch IDGenethonSTR_Batch1
Submitted DateJul 11, 2002
Publication CitedN.D.
First entry to dbSNPJul 11 2002 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodPCR
Ascertainment Samplesize56
PopulationN.D.
Allele
Observed Allele(CA)/19/20/21/22
Ancestral Allele
Allele OriginN/A
SNP ClassMicrosatellite
CpG CodenonCpG
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
CA strand primer CCTTCACCCTCAAACTTACCGT strand primer ACCTGAGTTGGCTAATGTCTGThe microsatellite repeat motif and flanking sequence for thisvariation submission was extracted from human genome sequence for contigannotation purposes. NCBI makes no warranty that the inferred repeatmotif is the correct sequence for the alleles as reported with frequencydata.MOLTYPE: Genomic

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss4911275|allelePos=57|len=94|taxid=9606|alleles='(CA)/19/20/21/22'|mol=Genomic
 AAAAAAAACA AGTCAGTACC
 CCTTCACCCT CAAACTTACC TTCTGCAATT CATAAA
 N
 CATCCTATAC AGACATTAGC CAACTCAGGT
 CTACAAA

  Submitted Frequency for ss4911275 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
CEPH_GENETHON
- MULTI-NATIONAL 		56(CA)19=0.75900000
(CA)21=0.16700000
(CA)20=0.03700000
(CA)22=0.03700000
0.393 +/-0.1030.390GenethonSTR_Batch1GENETHON


  dbSNP summary of Genotypes for ss4911275 back to top
No sufficient data to compute Hardy-weinberg probability for ss4911275.


  Submitted individual genotype for ss4911275 back to top
There is no individual genotype data for ss4911275.

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