Submitted SNP(ss) Details: ss4911265

Submitted SNP(ss) Details: ss4911265

Submitter
Handle	GENETHON
Submitter SNP ID	AFM016yg1
RefSNP(rs#)	rs3219507
Submitted Batch ID	GenethonSTR_Batch1
Submitted Date	Jul 11, 2002
Publication Cited	N.D.
First entry to dbSNP	Jul 11 2002 12:00:00:000AM

Resource Links
STS Accession	Z23284
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	D15S143
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	PCR
Ascertainment Samplesize	56
Population	N.D.

Allele
Observed Allele	(CA)/29/30/32/33/34
Ancestral Allele
Allele Origin	N/A
SNP Class	Microsatellite
CpG Code	nonCpG

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
CA strand primer CTAAGGAGGCAACAGCAAAGGT strand primer ATGTAAAGACTGGTATCTGTAGCACThe microsatellite repeat motif and flanking sequence for thisvariation submission was extracted from human genome sequence for contigannotation purposes. NCBI makes no warranty that the inferred repeatmotif is the correct sequence for the alleles as reported with frequencydata.MOLTYPE: Genomic

Fasta sequence (Legend)

 AGATATGCTC AGAGCATATG TCTTTACATG GCAAATGGCA CACAAATGAC TGAGGCTTTA
 TCGTCATTCC TAATGTAGGC AGCACCTAGT GGTGAGAACA TATGAAATCC CAGC
 CTAAGGAGGC AACAGCAAAG GCACCTGAGT CAAGGTTGCA CATAATTGAT TAGCCTACCC
 ACTGCCACCG TCCTA
 N
 ATGTAGGAGT CTAGGACTTA GTTACAGAAT CTGTGCTACA GATACCAGTC TTTACAT
 TTGTCTACAT TTC

Submitted Frequency for ss4911265

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
CEPH_GENETHON - MULTI-NATIONAL	56	(CA)29=0.28600001 (CA)32=0.08900000 (CA)33=0.51800001 (CA)34=0.07100000	(CA)30=0.03600000	0.636 +/-0.066		0.630	GenethonSTR_Batch1	GENETHON

dbSNP summary of Genotypes for ss4911265

No sufficient data to compute Hardy-weinberg probability for ss4911265.

Submitted individual genotype for ss4911265

There is no individual genotype data for ss4911265.

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