Submitted SNP(ss) Details: ss4911262

Submitted SNP(ss) Details: ss4911262

Submitter
Handle	GENETHON
Submitter SNP ID	AFM016xe5
RefSNP(rs#)	rs3219504
Submitted Batch ID	GenethonSTR_Batch1
Submitted Date	Jul 11, 2002
Publication Cited	N.D.
First entry to dbSNP	Jul 11 2002 12:00:00:000AM

Resource Links
STS Accession	Z16425
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	D21S259
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	PCR
Ascertainment Samplesize	56
Population	N.D.

Allele
Observed Allele	(CA)/20/21/22/23/24/25/27
Ancestral Allele
Allele Origin	N/A
SNP Class	Microsatellite
CpG Code	nonCpG

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment
CA strand primer AGAATGTGGTCTCACAAGCCGT strand primer AGGGAATGTCAATGAAAACCThe microsatellite repeat motif and flanking sequence for thisvariation submission was extracted from human genome sequence for contigannotation purposes. NCBI makes no warranty that the inferred repeatmotif is the correct sequence for the alleles as reported with frequencydata.MOLTYPE: Genomic

Fasta sequence (Legend)

 GATAGTGTTA CAGAGATGGC TCAGATTCTA GAATTATTCC TGAGACAGGC TAACTGGACC
 ATCTGCAATG ATTCATATCA TGCGTGGTCT TCAGGAGTCC ACAAGGAGAA AGAAAATATT
 TAAACTTTTA TGCTAGTAAC TTTTATCTCA TTCTTTTAAA ACTGTATGTT GCAGTATATA
 AAAGCATTAA TACAATAATA TATGCATACA ATTTATGTCT GTATACAATC ATACAGTGGT
 GTGATCAAAA CCTTTATCCT GAAGGA
 AGAATGTGGT CTCACAAGCC TA
 N
 GGCCATGCAT GGCGGTTGTG AGATAGTAAC GCAATGGGTT TTCATTGACA TTCCCT
 ATTGGTGGTT GTCCTTTCAA GAGTCTCTCC TGGGTGGG

Submitted Frequency for ss4911262

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
CEPH_GENETHON - MULTI-NATIONAL	56	(CA)21=0.06000000 (CA)22=0.18000001 (CA)23=0.28000000 (CA)24=0.14000000 (CA)25=0.25999999	(CA)20=0.04000000 (CA)27=0.04000000	0.795 +/-0.030		0.790	GenethonSTR_Batch1	GENETHON

dbSNP summary of Genotypes for ss4911262

No sufficient data to compute Hardy-weinberg probability for ss4911262.

Submitted individual genotype for ss4911262

There is no individual genotype data for ss4911262.

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