Submitted SNP(ss) Details: ss44840958

Submitted SNP(ss) Details: ss44840958

Submitter
Handle	ABI
Submitter SNP ID	hCV198155
RefSNP(rs#)	rs13258167
Submitted Batch ID	xplore_hum_chr8_1
Submitted Date	Jul 19, 2005
Publication Cited	N.D.
First entry to dbSNP	Jul 19 2005 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	XPLORE
Ascertainment Samplesize	10
Population	Celera_Donors

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 12
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 ACTATTATTT GGGAGAATTT CTTTTGGAAA CGATTCTGAA GTTAACTTAG GATCATCTGT
 ATAGCAGACA ATGTTGAATC TCCTTCCCAT TCCTTCTTGC CACTTTTGCA TGCACCCCAC
 CCCGATTTTG TGGTCTGGTG CTTTCAGTCC CCCACCCCCA ATTCCTGTAG CTCTTTGGAG
 GACAACTCTC AGGCTGATGG AGCCACTTTG TGACAAGGGC AGAAAGTGGG AAGTGCCTGA
 GGGCCTATGA TCCTTTGCAC ACCCTGAGAC TATCATCCAA TGAGTATGGG ATGAAGGAGC
 R
 TGAACCTGCA ACACAAATAG GTCTAATTCA TACTCCAGAG TGCTATAGGG TTAGACTGAA
 TGAAGTCACA CTCTGGGAGA TTCTGTCCAA GCTAAGTCAA ACCCTTCCTC CACTTTCTCC
 CTTCCCTGCT GTGCTTTCCC TGCCCACTTA AGGGTTTCCC CTGGGAGTTC TACTTCTGAG
 GAACCCAATC TGAGACAATA CAGTATTATA AAGGCTCTCA ATTCATTTTC CTTCATTTGA
 GAGCCTAAAT TTTTATCCTT CTTATTTCTT TTAGCAAAAA GTATAATAAT TCACCATTTC

Submitted Frequency for ss44840958

There is no frequency submission for ss44840958.

dbSNP summary of Genotypes for ss44840958

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
HAPMAP-CHB	82	82	A=0.98780489	G=0.01219512	A/A=0.97560978 A/G=0.02439024	Pr(chiSq=0.000,df=1) =1.000	Genotype Freq.
HAPMAP-ASW	96	96	A=0.56250000	G=0.43750000	A/G=0.45833334 A/A=0.33333334 G/G=0.20833333	Pr(chiSq=0.227,df=1) =0.655	Genotype Freq.
HAPMAP-MEX	100	100	A=0.77999997	G=0.22000000	A/A=0.62000000 A/G=0.31999999 G/G=0.06000000	Pr(chiSq=0.228,df=1) =0.655	Genotype Freq.
HAPMAP-CHD	170	170	A=0.95882350	G=0.04117647	A/A=0.91764706 A/G=0.08235294	Pr(chiSq=0.013,df=1) =1.000	Genotype Freq.
HapMap-JPT	172	172	A=0.98837209	G=0.01162791	A/A=0.97674417 A/G=0.02325581	Pr(chiSq=0.000,df=1) =1.000	Genotype Freq.
HAPMAP-GIH	176	176	A=0.77840906	G=0.22159091	A/A=0.60227275 A/G=0.35227272 G/G=0.04545455	Pr(chiSq=0.039,df=1) =1.000	Genotype Freq.
HAPMAP-TSI	176	176	A=0.65909094	G=0.34090909	A/G=0.47727272 A/A=0.42045453 G/G=0.10227273	Pr(chiSq=0.339,df=1) =0.584	Genotype Freq.
HAPMAP-LWK	180	180	G=0.58888888	A=0.41111112	A/G=0.51111114 G/G=0.33333334 A/A=0.15555556	Pr(chiSq=0.278,df=1) =0.655	Genotype Freq.
HapMap-CEU	226	226	A=0.80088496	G=0.19911504	A/A=0.66371679 A/G=0.27433628 G/G=0.06194690	Pr(chiSq=2.210,df=1) =0.150	Genotype Freq.
HapMap-YRI	226	226	A=0.50442475	G=0.49557522	A/G=0.42477876 A/A=0.29203540 G/G=0.28318584	Pr(chiSq=2.555,df=1) =0.150	Genotype Freq.
HAPMAP-MKK	286	286	G=0.60489511	A=0.39510489	A/G=0.48251748 G/G=0.36363637 A/A=0.15384616	Pr(chiSq=0.013,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss44840958

There is no individual genotype data for ss44840958.

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