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Submitted SNP(ss) Details: ss44365626           
Submitter
HandleABI
Submitter SNP IDhCV1480328
RefSNP(rs#)rs4955368
Submitted Batch IDxplore_hum_chr3_1
Submitted DateJul 18, 2005
Publication CitedN.D.
First entry to dbSNPJul 18 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss44365626|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
 TGATTTAAAT AATAACTAGT GTAGCTCACG AACTTAAACT TTCCATTGGT TATAACATAC
 CATTTGTAAC TTCATTTAAA AATCCCCACA TTCATCCAGT TGTTATTCAC TCACTTTCAA
 ATTATTATTA TTATTATCAT TTTTGTAGAA ACAAAATCTC ACTATGTTGT CCAGGTTGGT
 CTCGAATTTC TGGGCTCAAG CAATCCTCCT GCCTTGGTCC CAAAGTGCAA GGATTACAGG
 AATAAGCCAT GGTGCCTGGC CTCAAATTCA CTTGTTTAGA TCCCATTTCA GTCTGAGGGG
 Y
 TCAGGGGGCT CCCTTCACTG TTTGGGTGCA GGCTCGGCTG CAAATCTTCT GTAGAGAGAA
 TTCTCGGGGT GGCTCTTACA CATCATGGGT ACCTCTCCAC CTCACCCTCT CACCCTCTCA
 CCAGGTAGAC TGGGCAGGCA ACGGCATGCA CATCGCATCT GCCACCATGG GGAGCAGATA
 TGGCAGCATC AGCCGTCACA TCATCAAGGG AATTCTGCCC TTCTTGGATT CCATTTTGCT
 CGATAGACAT GGTTTATTGA GCACTTTTTT CATCAGAGTA TAGACATAAA GAAGGTCCAT

  Submitted Frequency for ss44365626 back to top
There is no frequency submission for ss44365626.


  dbSNP summary of Genotypes for ss44365626 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
HapMap-CEU100100T=0.91000003
C=0.09000000T/T=0.86000001
C/T=0.10000000
C/C=0.04000000
Pr(chiSq=7.585,df=1)
=0.010		Genotype
Freq.
HapMap-YRI116116C=0.76724136
T=0.23275863C/C=0.62068963
C/T=0.29310346
T/T=0.08620690
Pr(chiSq=1.866,df=1)
=0.200		Genotype
Freq.

  Submitted individual genotype for ss44365626 back to top
There is no individual genotype data for ss44365626.

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