Submitted SNP(ss) Details: ss44365622

Submitted SNP(ss) Details: ss44365622

Submitter
Handle	ABI
Submitter SNP ID	hCV2094853
RefSNP(rs#)	rs12489864
Submitted Batch ID	xplore_hum_chr3_1
Submitted Date	Jul 18, 2005
Publication Cited	N.D.
First entry to dbSNP	Jul 18 2005 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	XPLORE
Ascertainment Samplesize	10
Population	Celera_Donors

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 13
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 CGTCAATTCT AGATTAACCA TAAAACATGT TACAGGCAAA AATCTGTAAA CAGAGTGCAG
 AAGATACAAC ATAGATTGTT AATGGGAATA AGAACCTACT TTTAGCAGAT GTTATTGTTA
 AGAAATTATA TGTTATAGTA TGTTATTTAA AATAGGAAAA TACTCATATA AATTGTTTTA
 CTCTACCCTA AGAGAAACCA TCTTGTTCAT TGAAGCAATT TCAAACCTGT CAATTTCAGG
 CATATATGAT TTAAATGGAC CTTTGAGACC ATCAGAGAGC TCCTAAATTT ACTGACACTA
 R
 TCATTTTACT AATGAACCTT ATTAGCTCTG CAAACCACTT CTTAGCTTAG GATTCAACAT
 CTAGTCAGTA AGGTAGCATA TAATACTCAA CATATAGCCA TTCATTTAAT TAGCTGTTAT
 TGGGTGACTC AATATTCAGT ATTTGGTTCT ATTCTCTGTT TTAAACACAT TATCCTTTTC
 ATCTCACCAC CCTAAGGAGG AGGCTATAAT AATATACCTA TATATAATAA AATCAATAAT
 AAGATACAAA TGAGGAAATT AAATATGCCA ATGAGAAATA TATAATATTC AAATGAGGAA

Submitted Frequency for ss44365622

There is no frequency submission for ss44365622.

dbSNP summary of Genotypes for ss44365622

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
HapMap-CEU	226	226	G=0.99115044	A=0.00884956	G/G=0.98230088 A/G=0.01769911	Pr(chiSq=0.000,df=1) =1.000	Genotype Freq.
HapMap-HCB - EAST ASIA	86	86	G=0.61627907	A=0.38372093	G/G=0.41860464 A/G=0.39534885 A/A=0.18604651	Pr(chiSq=1.158,df=1) =0.294	Genotype Freq.
HapMap-JPT	172	172	G=0.59302324	A=0.40697673	A/G=0.51162791 G/G=0.33720931 A/A=0.15116279	Pr(chiSq=0.309,df=1) =0.584	Genotype Freq.
HapMap-YRI	226	226	G=0.98672569	A=0.01327434	G/G=0.97345132 A/G=0.02654867	Pr(chiSq=0.001,df=1) =1.000	Genotype Freq.
HAPMAP-ASW	98	98	G=0.95918369	A=0.04081633	G/G=0.91836733 A/G=0.08163265	Pr(chiSq=0.007,df=1) =1.000	Genotype Freq.
HAPMAP-CHB	82	82	G=0.54878050	A=0.45121950	A/G=0.51219511 G/G=0.29268292 A/A=0.19512194	Pr(chiSq=0.048,df=1) =1.000	Genotype Freq.
HAPMAP-CHD	170	170	G=0.62941176	A=0.37058824	A/G=0.43529412 G/G=0.41176471 A/A=0.15294118	Pr(chiSq=0.380,df=1) =0.584	Genotype Freq.
HAPMAP-GIH	176	176	G=0.80681819	A=0.19318181	G/G=0.65909094 A/G=0.29545453 A/A=0.04545455	Pr(chiSq=0.240,df=1) =0.655	Genotype Freq.
HAPMAP-LWK	180	180	G=0.89444447	A=0.10555556	G/G=0.83333331 A/G=0.12222222 A/A=0.04444445	Pr(chiSq=11.198,df=1) =0.001	Genotype Freq.
HAPMAP-MEX	100	100	G=0.82999998	A=0.17000000	G/G=0.69999999 A/G=0.25999999 A/A=0.04000000	Pr(chiSq=0.309,df=1) =0.584	Genotype Freq.
HAPMAP-MKK	286	286	G=0.90559441	A=0.09440559	G/G=0.83216780 A/G=0.14685315 A/A=0.02097902	Pr(chiSq=2.849,df=1) =0.100	Genotype Freq.
HAPMAP-TSI	176	176	G=0.98863637	A=0.01136364	G/G=0.97727275 A/G=0.02272727	Pr(chiSq=0.000,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss44365622

There is no individual genotype data for ss44365622.

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