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Submitted SNP(ss) Details: ss35031699           
Submitter
HandleABI
Submitter SNP IDhCV2198228
RefSNP(rs#)rs16982341
Submitted Batch IDxplore_hum_chr22_1
Submitted DateJul 18, 2005
Publication CitedN.D.
First entry to dbSNPJul 18 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 2
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss35031699|allelePos=301|len=601|taxid=9606|alleles='A/G'|mol=Genomic
 AAGTTTCACA CTGGAATGGT CAGCTTTTAG CTTTGGTTCT ACAGCCCAGA CTCTTTATGA
 GCTAAATCAG GTCTACTTTT TCCCTAGGGT GGGTTTGCTG GAGTGACGTG TGACTTGGCA
 TTGTGTCACT GAGGCATGTG GCCACCTGAA TTGAATGTGT GAGTGGCTGT CAGAACAGAC
 TGTGTGTACC CTCCCTTGCT CCTCCCCACC CATCACCTCC AAAAGTAAGT GATGAAAATA
 GAGGAAGCCA TGGGGCCACA ATTAAGCTCA CTGCTTCACG TTTTCAATGT TGAACTTTAA
 R
 TCACACCCAA TTAATAATTC CTGAGAATGG ATAAGTTCTT AGAATTGAAA AATGCTGTTC
 AGCAGTCTTG TTGACTGCAA GAGTGTTTTC TTCTCCTGGC CGGTTCCTTT TAATGAACAG
 CCCTACCCTG AGTGTTCATT GTCTCAGCAA CAATGGCACT GAGGACAGTT GATTTGCTTG
 ACAGAAAATG TGTTAAATTA ACAGATCTAC TTCTTTAGCA AATCCTTTCT CTTCTCCATT
 CCCCATTATG TCTCTCTGTC TTCCTGAAAG GTTGTTTGTG AATTCTTTTA GGTGTGGGGA

  Submitted Frequency for ss35031699 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
AoD_Caucasian
- NORTH AMERICA 		92A=0.88999999
G=0.11000000
xplore_hum_chr22_1ABI
AoD_African_American
- NORTH AMERICA 		90A=0.92000002
G=0.08000000
xplore_hum_chr22_1ABI


  dbSNP summary of Genotypes for ss35031699 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
HapMap-CEU120120A=0.93333334
G=0.06666667A/A=0.88333333
A/G=0.10000000
G/G=0.01666667
Pr(chiSq=2.315,df=1)
=0.150		Genotype
Freq.
HapMap-YRI120120A=0.88333333
G=0.11666667A/A=0.78333336
A/G=0.20000000
G/G=0.01666667
Pr(chiSq=0.053,df=1)
=1.000		Genotype
Freq.

  Submitted individual genotype for ss35031699 back to top
There is no individual genotype data for ss35031699.

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