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Submitted SNP(ss) Details: ss28532827           
Submitter
HandleABI
Submitter SNP IDhCV22274770
RefSNP(rs#)rs367772561
Submitted Batch IDxplore_hum_chr11_1
Submitted DateJul 16, 2005
Publication CitedN.D.
First entry to dbSNPNov 10 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed Allele-/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 5
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss28532827|allelePos=301|len=601|taxid=9606|alleles='-/C'|mol=Genomic
 AGAGTGTGTA ACTGCCTGCT CTGCCCCACA CTGGAACAGT TAGGAGCACA AGTGTCTGCT
 GGGAGAAGCT GGGTATGGAG GTGGACGCTG AGCTGGGAGG GATGTAGGCG ACTTGCTAGT
 CTCTAGTAAA GAAAACCCAT GAAACCCCTC TTTAGTGGGC ATCTTTAAGA AGTCTCTCCC
 CATCAAGAAT GTGGCCCAGA CAACAGCAGG CAGAAGCCAT CTCACTCTTT TTTTTCTTCA
 AGCAGTAGAT GTCACGTTGG GTAGATGGGT TTGTACAGTG GTGGGGTGCC AGTTCCTTTT
 N
 GGGCTTGCTG TGTGTGACCA TCAGCTGTGT TCTTTTCAGC GGCAGGCAGT GTGGCCATGG
 AAGCCAGCTC TGACGGAGAG GAGGATGCAG AAAGTACAGA CAAGGTAACT GAGACAGTGA
 TGAATGGCGG CATGAAGGAA ACGCTCAGCC TCACTGTAGA TGCCAAGACA GAGACTGCGG
 TCTTCAAAAG GTAACCAGGG GTGAGATCCT GCTGGTAGCT TCAGGTTATT GGGAGGATGG
 TGGGGCAGAA ACCTCAAACA TTAAAATTTT TAATTTGATT CAAATGAATG TTCAGATACT

  Submitted Frequency for ss28532827 back to top
There is no frequency submission for ss28532827.


  dbSNP summary of Genotypes for ss28532827 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU120120C=0.85833335
T=0.14166667C/C=0.73333335
C/T=0.25000000
T/T=0.01666667
Pr(chiSq=0.047,df=1)
=1.000
Genotype
Freq.

  Submitted individual genotype for ss28532827 back to top
There is no individual genotype data for ss28532827.

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