NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss28532788           
Submitter
HandleABI
Submitter SNP IDhCV1345386
RefSNP(rs#)rs17884907
Submitted Batch IDxplore_hum_chr8_1
Submitted DateJul 19, 2005
Publication CitedN.D.
First entry to dbSNPNov 10 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 2
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss28532788|allelePos=301|len=601|taxid=9606|alleles='G/T'|mol=Genomic
 ACACAAGGAT ACAAAGGTTC TGACTCTCTC AAAAAGCTGG ACCCAGGCCT GGGCATCCCT
 GTGCACTGAG ATCTTTCCCC ATTGTGCCGT CTTCACAGTG AAGCATAGAC GGGTTATTTA
 GGCTGAGTCT CTAGCACAAT GTGACTGCCT GTGAGCTTTG CCTTAAGAAT TCCCTAAAGG
 GTTTTCTGCA GAACTGCTGT CCCTTGAGAT ACAATCAAGG GAATCTCAGA TGTGTTCAGT
 ATGTTTTGGA GACCTGGCGT ACTGCATCTG CCCCTCAAAG ATTCATAGTG TGCATAGGCC
 K
 GTTTTAGGGC CCCAAGAAGC TCTACACTAA TGAAACCTGT GTCGCCTTTA AAACCCCAAA
 TTGCAGAATC CTGTTTGATT ATGGAATTCT TTGTTTCTTA GAACACCTAT GAATCTACCT
 GTAAAACTAA TGTTGGACAA ATGCTGCCTG AAGCTGAGCA CGTCAGTGAG GAACAGCAGG
 ACACACAGAG AGAGGGAAAG AAAGCACAGA AGAAAGATGC TTCAAGAAAG GAAAACATGG
 GTAGAGGGCA AGTTGAAATG CCTATATTGC TAACTGTGGT GCTTCTTACA AATGAGTCCT

  Submitted Frequency for ss28532788 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
AoD_African_American
- NORTH AMERICA 		90T=0.81999999
G=0.18000001
xplore_hum_chr8_1ABI
AoD_Caucasian
- NORTH AMERICA 		92T=0.69999999
G=0.30000001
xplore_hum_chr8_1ABI


  dbSNP summary of Genotypes for ss28532788 back to top
No sufficient data to compute Hardy-weinberg probability for ss28532788.


  Submitted individual genotype for ss28532788 back to top
There is no individual genotype data for ss28532788.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement