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Submitted SNP(ss) Details: ss28532784           
Submitter
HandleABI
Submitter SNP IDhCV1288249
RefSNP(rs#)rs17879296
Submitted Batch IDxplore_hum_chr3_1
Submitted DateJul 18, 2005
Publication CitedN.D.
First entry to dbSNPNov 10 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodXPLORE
Ascertainment Samplesize10
PopulationCelera_Donors
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 4
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss28532784|allelePos=301|len=601|taxid=9606|alleles='A/C'|mol=Genomic
 AAATCACTTT GATCATAATT CTGTGTATTT TATTCTCAAA ACTTTCTTTA GCTAATGATG
 TCTCATGTTA CATCAATGAA TTCACTTTCA CCATTTTACT TAGCAGTATG ACACTGACCA
 TTTTGGTCCT CTCAATTAGG ATATTTCTTA TTCTCCTTTT AATTACTTCA CTGCTATTTA
 TTTCTGAGTG CTTATCAAGA AAATATAATT TTATAATAAC TTAATAAGAG GAGTAGAATC
 TCTCTAACTA GATGATTCTA AGCAGTTTGG TATCCTTTAT GTTGTATACT TTTCATAGAC
 M
 ATTGAAATGA AAATCTTAGG AAAAGTTTTT GAATTACAAG AATTGAATTA TATTTCCAGA
 ATATTTCTGA GCTTGTGCCA ACGTAGTCTA CATTGTGAGC AATGGTGACA ATATTAGTTC
 CCCAAATGAA AACAACATAA ATTTATATTA ATGTTTATTT TATCCAGGGT AATCATAGTA
 ACACATTTTT TGGCATTATT AATTTTAATT AACCTGTTAA TTGCCACATA TAAATGATAC
 CAAATTTTTT CTTTCTATAA AATGCATATG AGCCAAACTA CTCTTACTAG ATTATTTTGA

  Submitted Frequency for ss28532784 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
AoD_Caucasian
NORTH AMERICA
92C=0.67000002
A=0.33000001
xplore_hum_chr3_1ABI
AoD_Japanese
EAST ASIA
90C=0.60000002
A=0.40000001
xplore_hum_chr3_1ABI
AoD_African_American
NORTH AMERICA
90C=0.69999999
A=0.30000001
xplore_hum_chr3_1ABI
AoD_Chinese
EAST ASIA
90C=0.70999998
A=0.28999999
xplore_hum_chr3_1ABI


  dbSNP summary of Genotypes for ss28532784 back to top
No sufficient data to compute Hardy-weinberg probability for ss28532784.


  Submitted individual genotype for ss28532784 back to top
There is no individual genotype data for ss28532784.

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