>gnl|dbSNP|ss28532777|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
AGTTGTATAT ACAACTTCAT AAAATCTGAA GAAATAAATC AAAATAGGCA TTATTGAAAA
GCAGCAACAT AAATGTATGT CATTGGGATT CTACAATGGG TTTGCTGTAA TTATATCGTA
CATTGATGTT AACTCTCAGT TTCCTGACAG CTAAAACAAA GAGAAAAAAA TATTATAGGT
ATTAAAATGT TTATACAAAT CATTTAAATC TGCAGAGACA TGCATGCTTG TATTTAAGTG
CTGAGGGTGG ACTGTTCAAC ATAACAGATG ATTAGCTTTC ACCTGAATTT TACAAACATG
Y
TATTTAAGGC AACAAATACA TTAATTCTAT ATAGAAGTTA AGAGACCATA CTTCAGTGGA
GGGATTTCCT TAAGAGACCA GCAGACCCAA CATTCCAGGT CAACAGAATC AAAGCAAATG
CTGTTTATAA TAATACAATT TAGGGATAGT TGTGGTAAAT TTTAATGACA TTTCCAAAAC
CAATTGGAGC CTATGCACCT TAATTTGAAA CATTGTGAAA TGGACTCAGG ATTAATTTGA
GAATAGAAGA AAAGAAGACT ATTCCATAAT TTCTTTTACA GAAAATTATT TATCTTCTTT
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HAPMAP-CHB | 80 | 80 | C=0.68750000
| T=0.31250000 | C/C=0.47499999
C/T=0.42500001
T/T=0.10000000
| Pr(chiSq=0.005,df=1)
=1.000 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 84 | 84 | C=0.82142860
| T=0.17857143 | C/C=0.66666669
C/T=0.30952382
T/T=0.02380952
| Pr(chiSq=0.127,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-ASW | 96 | 96 | C=0.81250000
| T=0.18750000 | C/C=0.62500000
C/T=0.37500000
| Pr(chiSq=0.869,df=1)
=0.371 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | C=0.70999998
| T=0.28999999 | C/C=0.47999999
C/T=0.46000001
T/T=0.06000000
| Pr(chiSq=0.685,df=1)
=0.439 | Genotype
Freq. |
| HAPMAP-CHD | 168 | 168 | C=0.69642860
| T=0.30357143 | C/T=0.51190478
C/C=0.44047618
T/T=0.04761905
| Pr(chiSq=3.728,df=1)
=0.100 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | C=0.70348835
| T=0.29651162 | C/T=0.47674417
C/C=0.46511629
T/T=0.05813954
| Pr(chiSq=1.753,df=1)
=0.200 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | C=0.77272725
| T=0.22727273 | C/C=0.57954544
C/T=0.38636363
T/T=0.03409091
| Pr(chiSq=0.880,df=1)
=0.371 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | C=0.63636363
| T=0.36363637 | C/T=0.45454547
C/C=0.40909091
T/T=0.13636364
| Pr(chiSq=0.028,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | C=0.92777777
| T=0.07222223 | C/C=0.87777776
C/T=0.10000000
T/T=0.02222222
| Pr(chiSq=5.797,df=1)
=0.020 | Genotype
Freq. |
| HapMap-CEU | 224 | 224 | C=0.66517860
| T=0.33482143 | C/C=0.45535713
C/T=0.41964287
T/T=0.12500000
| Pr(chiSq=0.375,df=1)
=0.584 | Genotype
Freq. |
| HapMap-YRI | 224 | 224 | C=0.90625000
| T=0.09375000 | C/C=0.81250000
C/T=0.18750000
| Pr(chiSq=0.214,df=1)
=0.655 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | C=0.87062937
| T=0.12937063 | C/C=0.74825174
C/T=0.24475524
T/T=0.00699301
| Pr(chiSq=1.070,df=1)
=0.317 | Genotype
Freq. |
