NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss255419738           
Submitter
HandleBL
Submitter SNP IDSNP17_20_55739
RefSNP(rs#)rs143646965
Submitted Batch IDIrish1_chr20
Submitted DateAug 20, 2010
Publication CitedN.D.
First entry to dbSNPAug 20 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIRISH_GENOME_SEQUENCING
Ascertainment Samplesize2
PopulationIrish
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss255419738|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 AACACTGTCC ATCTCAGTGA GCATTCCATG TGCATGTGAA AAAAAAACGG GTATTCTGTA
 ATTATTGGAG GTAGTGTTCT ATACATGTTA ATTGGATTGA GGTGGTTATT CAGATTTGCT
 ACATTCTTTT TTTTTTTTTT CGAGACAGAG TCTTGCTCTG TCACCAACCA GGCTGGAGTG
 CAGTGGCACG ATCTTGGGTC ACTGCAACCT CCACCTCCCG GGTTCAAGTG ATTCCCTTGC
 ATTAGCCTCC
 Y
 GAGTAGCTGG GACTACAGGT GCGCGCCACC ATGCCCGGCT AATTTTTTGT ATTTTAGTAG
 AGACGGGATT TCACCATGTT GGCCAGGCTG GTCTTGAACT CCTGACCTCG TGATCTGCCT
 GCCTCGGCCT CCCAAAGTGC TGGGATTACA GGCATGAGCC ACCACGCCTG GCCATTTGCT
 ACATTCTTAC TAAATGTTTG GTCTAGTTAT GCTATCAATA ACCAACAGTG AATGATAAAA
 TTTCCAACTG

  Submitted Frequency for ss255419738 back to top
There is no frequency submission for ss255419738.


  dbSNP summary of Genotypes for ss255419738 back to top
No sufficient data to compute Hardy-weinberg probability for ss255419738.


  Submitted individual genotype for ss255419738 back to top
There is no individual genotype data for ss255419738.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement