NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss255419678           
Submitter
HandleBL
Submitter SNP IDSNP5_20_13900
RefSNP(rs#)rs6053810
Submitted Batch IDIrish1_chr20
Submitted DateAug 20, 2010
Publication CitedN.D.
First entry to dbSNPAug 20 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodIRISH_GENOME_SEQUENCING
Ascertainment Samplesize2
PopulationIrish
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss255419678|allelePos=251|len=501|taxid=9606|alleles='A/G'|mol=Genomic
 CTGATAACCA TCCTTCTACT CTCTATCTCC CTTGAATTCA GTAGTTTTGA TTTTTAGATT
 TCACAAATAA GTGAGAACAT GCAATATTTG TCTTTATGTT CCTGGCTTAT TTCACTTAGC
 ATAATGGCCT CCAGTTCCAT CCATGTTATT GCAAATGACA GCATCTCTTT CTTTTTTATG
 GCTGAATAAT ACTCCACTGT GTATAAGTTC CACATTTTCT TTATCCACTC ATTTGTTGAT
 TGACACTTAC
 R
 TTGCTTCTAA ATCTTGGCTA TTGTGAATAG TGCTGCAACA AGCACAGGTG TGCAGATATC
 TATTCAATAT TCTTATTTCC TTTTGGAGGG GAGTGTGTAC CTAGCAGTGG GATTGCTGGA
 TTGTATGGTA ACTCTATTTT CAGTTTTTTT AGGAACCTCC AAACTGTTCT CCATAGTGGT
 TGTACTATCT TACGTTCACA CCAGTAGCAT ACAAGGGTTT CCCTTTCTCC AAATCCTTGC
 CAGCATTTGC

  Submitted Frequency for ss255419678 back to top
There is no frequency submission for ss255419678.


  dbSNP summary of Genotypes for ss255419678 back to top
No sufficient data to compute Hardy-weinberg probability for ss255419678.


  Submitted individual genotype for ss255419678 back to top
There is no individual genotype data for ss255419678.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement