NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss19829373           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuFF-200402.chr1.NT_004668.16_8902412
RefSNP(rs#)rs10737553
Submitted Batch IDCSHL-HuFF-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUFF-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuFF101b19600401433952.R -251 68

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19829373|allelePos=501|len=1001|taxid=9606|alleles='G/A'|mol=Genomic
 agggtctgga gtggacctcc agcaaactgc agcagacctg cagaaaaggg gcctgactgt
 tagaagaaaa actaacagaa agcaacaaca tcaacatcaa cataaaggac ccccacaaaa
 aaaccccatt caaaaatcat cagcctcaaa gatcaaaggt agataaaccc atgaagatga
 ggaaaaacca ctgcaaaaac gcagaaaatt ccgaaaacaa gaatgcatat tgtcttccaa
 atgatcacaa ctcctctcca gcatgggcat aaaactggac agagaatgag attgatgaat
 tgacagaagt aggcttcaga aggtgggtaa taacaaactt ctctgagcta aaggattgtg
 ttctaaccca atgcaaggaa gctaggaacc ttggtaaaag gttacaggaa ctgctaacta
 gaataactgg tttagagagg aacaaaaatg acctgatgga gctaaagaac acagcatgaa
 aactttgtga agcttaccca
 R
 gtatcagtag cagaattgat caagcagaag aaaggatatc agagattgaa gatcaactta
 ctgaaataag gcatgaagac aagattagag aaaaaagaat gaaaaggaat gaacaaagcc
 tccaagaaac atgggactat gtaaaaagac tgaaactacg tttgttggtg tacctgaaag
 tgacagagag aatggaacca agttggaaaa cacacttcag gatattatgc aggagtactt
 tcccaaccta gcaagacagg ccaacattca aattcaggaa atacagagaa caccactaag
 atactccttg agaagagcaa tgccaagaca tctaatcatc agattctcca aggctgaaat
 gaaggaaaaa atgttaaagg cagccagaga gaaaggtcag gttacccata aagggaagca
 tatcagaatg acagcagatc tctgcagaaa tgagccagaa gagagtgggg gccaatattc
 aacattctta aagaaaagaa

  Submitted Frequency for ss19829373 back to top
There is no frequency submission for ss19829373.


  dbSNP summary of Genotypes for ss19829373 back to top
No sufficient data to compute Hardy-weinberg probability for ss19829373.


  Submitted individual genotype for ss19829373 back to top
There is no individual genotype data for ss19829373.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement