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Submitted SNP(ss) Details: ss19829369           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuFF-200402.chr1.NT_032977.6_18584195
RefSNP(rs#)rs10789027
Submitted Batch IDCSHL-HuFF-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCSHL-HUFF-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuFF101b19600401701591.R 581 28

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19829369|allelePos=218|len=593|taxid=9606|alleles='A/C'|mol=Genomic
 CCCATCCAAT CCCTCCTGCT TGGTGACTTC CCCGGGGACT TTTATCTGTC CCCTGCACAT
 GGACACCGTA AGGACCATGG GCTGGCTGGT TACATTATCT CGTTATTGTT ATACTGGTTC
 TGGCCTTCCC TAGTGCCTGT TGGGGTGTGT GTGTGCAATT TGCCATAATC ACTTATGCAG
 GAGAAGGAAG GCCAAACACT aaaaaaaaaa aaaaaaa
 M
 aaaaaaaaac aaaaaacaaa caaacaaaca aaaaCACCCA AAAACTCAAG ATGAAGAAAC
 AAGAGAAAAA TCGATGATAA GTATCCAACA CTGCCTACTT TTACTATGGA ATGTGGTCCA
 ATTACCAGGG AATTATTGGC ATGCCAGTTA GCCTCTAGGT CACTGTGTCC CTGAATGGAA
 CAATTTGTGA AACATGCTTA ACAAGGgcca tcatgcttgg ctaatttctt aattttttgt
 agaaacaagg tcttgctatg ttgccaaggc tgatcttgaa ctcctaagct caagcaatcc
 tcctgcttca gcctcccaca tcgctgggga ttacaggtgt gagccacATA TTTTAAATTC
 AATAAAAAGT TTTAG

  Submitted Frequency for ss19829369 back to top
There is no frequency submission for ss19829369.


  dbSNP summary of Genotypes for ss19829369 back to top
No sufficient data to compute Hardy-weinberg probability for ss19829369.


  Submitted individual genotype for ss19829369 back to top
There is no individual genotype data for ss19829369.

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